RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PPP4R1LQ9P1A2 415 aa9.49□□□□□ -0.89
NR1I3-222ENST00000506018 CBLCQ9ULV8 474 aa9.49□□□□□ -0.89
NR1I3-222ENST00000506018 ABCG2Q9UNQ0 655 aa9.49□□□□□ -0.89
NR1I3-222ENST00000506018 C19orf53Q9UNZ5 99 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-222ENST00000506018 TMED5Q9Y3A6 229 aa9.49□□□□□ -0.89
NR1I3-222ENST00000506018 FIS1Q9Y3D6 152 aa9.49□□□□□ -0.89
NR1I3-222ENST00000506018 MED12Q93074 2177 aa9.49□□□□□ -0.89
NR1I3-222ENST00000506018 ANKHD1Q8IWZ3 2542 aaKnown RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 MED12LQ86YW9 2145 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 MBD3L4A6NDZ8 208 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 MBD3L3A6NE82 208 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 MBD3L5A6NJ08 208 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 NPIPB8E9PQR5 432 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 PDPK1O15530 556 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 KCNH1O95259 989 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 IL18BPO95998 194 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 TROVE2P10155 538 aaKnown RBP eCLIP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 DPP4P27487 766 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 MAPK1P28482 360 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 EVI2BP34910 448 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 SOX18P35713 384 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 ASMTP46597 345 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 DGKQP52824 942 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 DSCR4P56555 118 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 EEFSECP57772 596 aaKnown RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 SRYQ05066 204 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 GANABQ14697 944 aaKnown RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 FAM219BQ5XKK7 198 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 CLEC6AQ6EIG7 209 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 RNF165Q6ZSG1 346 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 ZCCHC23Q6ZST2 131 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 R3HCC1LQ7Z5L2 792 aaKnown RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 OR6Y1Q8NGX8 325 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 CEP70Q8NHQ1 597 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 MBD3L2Q8NHZ7 208 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 EFHD2Q96C19 240 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 NTNG2Q96CW9 530 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 ZBED6CLQ96FA7 236 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 ZNF764Q96H86 408 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-222ENST00000506018 CCT7Q99832 543 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 SIKE1Q9BRV8 207 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 GLIPR2Q9H4G4 154 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 RAP2CQ9Y3L5 183 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 L3MBTL1Q9Y468 752 aa9.48□□□□□ -0.89
NR1I3-222ENST00000506018 PDZD2O15018 2839 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 TACC2O95359 2948 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 FBN2P35556 2912 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 EEF1E1-BLOC1S5C9J1V9 151 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 LINC01387J3KSC0 135 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 EEF1E1O43324 174 aaKnown RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 SCO2O43819 266 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 SHOX2O60902 331 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 SNNO75324 88 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 TGDSO95455 350 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 TMIGD3P0DMS9 266 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 RPL3P39023 403 aaKnown RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 ZNF136P52737 540 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 MANFP55145 182 aaKnown RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 KRTAP10-9P60411 292 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 PSG6Q00889 435 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 GAB1Q13480 694 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 FBXL19-AS1Q494R0 122 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 FLYWCH1Q4VC44 716 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 ARL13AQ5H913 290 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 FBXW10Q5XX13 1052 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 DESI1Q6ICB0 168 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 NPSR1Q6W5P4 371 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 SEM1Q6ZVN7 128 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 SZRD1Q7Z422 152 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 GRAMD2AQ8IUY3 354 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 DDIASQ8IXT1 998 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 ZZZ3Q8IYH5 903 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 OR2L13Q8N349 312 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 RELL2Q8NC24 303 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 GOT1L1Q8NHS2 421 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 PIWIL2Q8TC59 973 aaKnown RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 PPCDCQ96CD2 204 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 ELP4Q96EB1 424 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 AMDHD1Q96NU7 426 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 SFXN3Q9BWM7 321 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 TBL1XR1Q9BZK7 514 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 REEP4Q9H6H4 257 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 FAM120CQ9NX05 1096 aaKnown RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 DNAJB12Q9NXW2 375 aaKnown RBP9.47□□□□□ -0.89
NR1I3-222ENST00000506018 SH3BP4Q9P0V3 963 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 STOML1Q9UBI4 398 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 POLQO75417 2590 aa9.47□□□□□ -0.89
NR1I3-222ENST00000506018 TUBAL3A6NHL2 446 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 UPK1AO00322 258 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 EDF1O60869 148 aaKnown RBP9.46□□□□□ -0.9
NR1I3-222ENST00000506018 FGF4P08620 206 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 PRPS2P11908 318 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 PEPDP12955 493 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 CD1EP15812 388 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 HPCAL1P37235 193 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 CPA2P48052 419 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 RFX3P48380 749 aa9.46□□□□□ -0.9
NR1I3-222ENST00000506018 RPL14P50914 215 aaKnown RBP9.46□□□□□ -0.9
NR1I3-222ENST00000506018 DIO3P55073 304 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms