RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 LRIT2A6NDA9 550 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 SLC28A1O00337 649 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 CHEK1O14757 476 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 HIST1H2AGP0C0S8 130 aaPredicted RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 UROSP10746 265 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 FERP16591 822 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 CTNNB1P35222 781 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 NPY2RP49146 381 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 TLE4Q04727 773 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 ELAVL3Q14576 367 aaKnown RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 ZNF630Q2M218 657 aaPredicted RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 ZNF691Q5VV52 312 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 HIST2H2AA3Q6FI13 130 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 SULT1C3Q6IMI6 304 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 RANBP3LQ86VV4 465 aaPredicted RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 PARGQ86W56 976 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 CSNK1A1LQ8N752 337 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 HIST1H2ACQ93077 130 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 OSBPL8Q9BZF1 889 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 AKIRIN1Q9H9L7 192 aaPredicted RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 COPS7BQ9H9Q2 264 aaPredicted RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 GRPEL1Q9HAV7 217 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 LHX3Q9UBR4 397 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 TRMT6Q9UJA5 497 aaKnown RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 REREQ9P2R6 1566 aa2.34□□□□□ -2.03
LINC00616-202ENST00000505874 INO80Q9ULG1 1556 aaPredicted RBP2.34□□□□□ -2.03
LINC00616-202ENST00000505874 NUP155O75694 1391 aa2.34□□□□□ -2.04
LINC00616-202ENST00000505874 ZFYVE16Q7Z3T8 1539 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 KDM5DQ9BY66 1539 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 KDM6BO15054 1643 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 DEPDC5O75140 1603 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 IGKV2D-24A0A075B6R9 120 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 A0A1B0GUA9 196 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 ATP6V1G1O75348 118 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 TIMP1P01033 207 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 PGK2P07205 417 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 NOP14P78316 857 aaKnown RBP2.33□□□□□ -2.04
LINC00616-202ENST00000505874 UBXN1Q04323 297 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 DPYSQ14117 519 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 CWC27Q6UX04 472 aaKnown RBP2.33□□□□□ -2.04
LINC00616-202ENST00000505874 CXCL17Q6UXB2 119 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 CHCHD4Q8N4Q1 142 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 ZNF561Q8N587 486 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 ZNF540Q8NDQ6 660 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 RNASE8Q8TDE3 154 aaKnown RBP2.33□□□□□ -2.04
LINC00616-202ENST00000505874 ANKRD49Q8WVL7 239 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 NEIL2Q969S2 332 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 C18orf25Q96B23 403 aaPredicted RBP2.33□□□□□ -2.04
LINC00616-202ENST00000505874 NOL4LQ96MY1 436 aaPredicted RBP2.33□□□□□ -2.04
LINC00616-202ENST00000505874 LIPT1Q9Y234 373 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 DHX57Q6P158 1386 aaKnown RBP2.33□□□□□ -2.04
LINC00616-202ENST00000505874 KIF1BO60333 1816 aa2.33□□□□□ -2.04
LINC00616-202ENST00000505874 LMTK2Q8IWU2 1503 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 UNC13BO14795 1591 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 DIP2CQ9Y2E4 1556 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 IQGAP3Q86VI3 1631 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 RNF17Q9BXT8 1623 aaKnown RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 TET3O43151 1660 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 ZC3H13Q5T200 1668 aaKnown RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 USP27XA6NNY8 438 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 LYPLA1O75608 230 aaPredicted RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 SEMG1P04279 462 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 STK19P49842 368 aaPredicted RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 SGSHP51688 502 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 DAZ2Q13117 558 aaKnown RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 SCARB2Q14108 478 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 CYB5R2Q6BCY4 276 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 B3GLCTQ6Y288 498 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 DPY19L2P2Q6ZN68 376 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 ZNF786Q8N393 782 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 ARIH2OSQ8N7S6 290 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 MLKLQ8NB16 471 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 ZNF397Q8NF99 534 aaPredicted RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 FIBINQ8TAL6 211 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 TMEM37Q8WXS4 190 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 DCUN1D4Q92564 292 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 DEFB118Q96PH6 123 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 DAZ3Q9NR90 486 aaKnown RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 STARD5Q9NSY2 213 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 AKAP7Q9P0M2 348 aaPredicted RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 TRPC4Q9UBN4 977 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 ZNF223Q9UK11 482 aaPredicted RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 DHRS7Q9Y394 339 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 USP6P35125 1406 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 ARHGAP31Q2M1Z3 1444 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 CNTLNQ9NXG0 1405 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 LRRK1Q38SD2 2015 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 RPRD2Q5VT52 1461 aaKnown RBP2.32□□□□□ -2.04
LINC00616-202ENST00000505874 FRMPD1Q5SYB0 1578 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 VWDEQ8N2E2 1590 aa2.32□□□□□ -2.04
LINC00616-202ENST00000505874 ABCA6Q8N139 1617 aa2.31□□□□□ -2.04
LINC00616-202ENST00000505874 MROH2AA6NES4 1674 aa2.31□□□□□ -2.04
LINC00616-202ENST00000505874 CHD4Q14839 1912 aa2.31□□□□□ -2.04
LINC00616-202ENST00000505874 A0A1W2PQ67 120 aa2.31□□□□□ -2.04
LINC00616-202ENST00000505874 ZNF320A2RRD8 509 aa2.31□□□□□ -2.04
LINC00616-202ENST00000505874 DHRS7CA6NNS2 312 aa2.31□□□□□ -2.04
LINC00616-202ENST00000505874 ERVV-1B6SEH8 477 aa2.31□□□□□ -2.04
LINC00616-202ENST00000505874 NPIPA2E9PIF3 369 aa2.31□□□□□ -2.04
LINC00616-202ENST00000505874 SNAI2O43623 268 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms