RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 PIGAP37287 484 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 CRATP43155 626 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 MAGEA8P43361 318 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 CPA2P48052 419 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 MAN2A2P49641 1150 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 NUDT2P50583 147 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 TNFSF10P50591 281 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 PSMD4P55036 377 aaKnown RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 FBXW4P57775 412 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 RPP38P78345 283 aaKnown RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 MRPS22P82650 360 aaKnown RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 TXNL4AP83876 142 aaKnown RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 CAPRIN1Q14444 709 aaKnown RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 NTRK2Q16620 822 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 EIF2S3LQ2VIR3 472 aaKnown RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 ZNF791Q3KP31 576 aaPredicted RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 COX20Q5RI15 118 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.22□□□□□ -0.93
NUP54-203ENST00000504173 ATAD3BQ5T9A4 648 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 FAM91A1Q658Y4 838 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 SPINK14Q6IE38 97 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 RTL4Q6ZR62 310 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 C16orf62Q7Z3J2 963 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 FITM2Q8N6M3 262 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 RBMXL3Q8N7X1 1067 aaKnown RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 BCORP1Q8N888 145 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 CATSPER1Q8NEC5 780 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 OR10G3Q8NGC4 313 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 XAGE5Q8WWM1 108 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 DIO2Q92813 273 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 TMEM125Q96AQ2 219 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 EFHD2Q96C19 240 aaPredicted RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 LRRC58Q96CX6 371 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 SGCZQ96LD1 299 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 C5orf34Q96MH7 638 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 ANKRD27Q96NW4 1050 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 COL21A1Q96P44 957 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 SIGLEC12Q96PQ1 595 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 CPPED1Q9BRF8 314 aaPredicted RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 SLC39A3Q9BRY0 314 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 BTBD2Q9BX70 525 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 MFRPQ9BY79 579 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 RUBCNLQ9H714 662 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 TRIM45Q9H8W5 580 aaPredicted RBP9.22□□□□□ -0.93
NUP54-203ENST00000504173 EFCAB1Q9HAE3 211 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 EXD2Q9NVH0 621 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 ARL8BQ9NVJ2 186 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 GIN1Q9NXP7 522 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 TAGLN3Q9UI15 199 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 CORO2BQ9UQ03 480 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 CSAG2Q9Y5P2 127 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 KCNE3Q9Y6H6 103 aa9.22□□□□□ -0.93
NUP54-203ENST00000504173 CNTRLQ7Z7A1 2325 aa9.21□□□□□ -0.93
NUP54-203ENST00000504173 TRAV17A0A0B4J275 112 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 OR6C70A6NIJ9 312 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 FXYD1O00168 92 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 TSPAN2O60636 221 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 UGT2B11O75310 529 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 SLC25A12O75746 678 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 NEURL1O76050 574 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 KCNK2O95069 426 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 IL33O95760 270 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 AK1P00568 194 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 NPPAP01160 153 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 ETFAP13804 333 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 ATP6V1C1P21283 382 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 MVDP53602 400 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 DSTNP60981 165 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 HPCAP84074 193 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 FADDQ13158 208 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 ART3Q13508 389 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 EFR3AQ14156 821 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 ZNF169Q14929 603 aaPredicted RBP9.21□□□□□ -0.94
NUP54-203ENST00000504173 KRT72Q14CN4 511 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 RGNQ15493 299 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 RUNDC3AQ59EK9 446 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 DCST2Q5T1A1 773 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 CCNJQ5T5M9 372 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 FIGNL1Q6PIW4 674 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 TRPM8Q7Z2W7 1104 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 NUP54Q7Z3B4 507 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 GALNT10Q86SR1 603 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 GOLM1Q8NBJ4 401 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 PSD4Q8NDX1 1056 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 MDS2Q8NDY4 140 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 RAB8BQ92930 207 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 ROPN1LQ96C74 230 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 LURAP1Q96LR2 239 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 ADOQ96SZ5 270 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 G6PC3Q9BUM1 346 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 THUMPD3Q9BV44 507 aaKnown RBP9.21□□□□□ -0.94
NUP54-203ENST00000504173 TRIM8Q9BZR9 551 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 TIMMDC1Q9NPL8 285 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 KLHL1Q9NR64 748 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 SLC5A6Q9Y289 635 aa9.21□□□□□ -0.94
NUP54-203ENST00000504173 TMEM247A6NEH6 219 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 HMGN4O00479 90 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 CBX6O95503 412 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 IGKV1D-16P01601 117 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 P04436 131 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms