RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 NUSAP1Q9BXS6 441 aaKnown RBP5.44□□□□□ -1.54
SOX2-OT-218ENST00000498731 NKX2-4Q9H2Z4 354 aa5.44□□□□□ -1.54
SOX2-OT-218ENST00000498731 MSRAQ9UJ68 235 aa5.44□□□□□ -1.54
SOX2-OT-218ENST00000498731 ADAM30Q9UKF2 790 aa5.44□□□□□ -1.54
SOX2-OT-218ENST00000498731 TBX21Q9UL17 535 aa5.44□□□□□ -1.54
SOX2-OT-218ENST00000498731 ING4Q9UNL4 249 aa5.44□□□□□ -1.54
SOX2-OT-218ENST00000498731 SLC6A5Q9Y345 797 aa5.44□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR10H1Q9Y4A9 318 aa5.44□□□□□ -1.54
SOX2-OT-218ENST00000498731 TRANK1O15050 2925 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZFHX2Q9C0A1 2572 aaPredicted RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 GSAPA4D1B5 854 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SUPT3HB4E1H0 165 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 AIPO00170 330 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SLC25A17O43808 307 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SLC43A1O75387 559 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 TNFRSF6BO95407 300 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PRR35P0CG20 571 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 CBSLP0DN79 551 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 G6PDP11413 515 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 HMGA1P17096 107 aaKnown RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 CBSP35520 551 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 AKR1C3P42330 323 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 DCDC1P59894 354 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 CXCR4P61073 352 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 MC2RQ01718 297 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 CAMK2GQ13555 558 aaPredicted RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 KEAP1Q14145 624 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR4D1Q15615 310 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 CHRNA6Q15825 494 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PTPRNQ16849 979 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 HYAL4Q2M3T9 481 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 C18orf21Q32NC0 220 aaPredicted RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PLA1AQ53H76 456 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 KLHL26Q53HC5 615 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 TMEM255AQ5JRV8 349 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 MRNIPQ6NTE8 343 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 TRAT1Q6PIZ9 186 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 EIF3MQ7L2H7 374 aaKnown RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZDHHC21Q8IVQ6 265 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SYNPOQ8N3V7 929 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PRR18Q8N4B5 295 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 KRTCAP2Q8N6L1 136 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF248Q8NDW4 579 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR1N1Q8NGS0 311 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 AKR7LQ8NHP1 331 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 WFDC5Q8TCV5 224 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 GATAD2BQ8WXI9 593 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SORCS1Q8WY21 1168 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PIGKQ92643 395 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ELMOD3Q96FG2 381 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 FCRL1Q96LA6 429 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 RDH12Q96NR8 316 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 TGM7Q96PF1 710 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 OR10A4Q9H209 315 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 MTG2Q9H4K7 406 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZDHHC6Q9H6R6 413 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 KRT84Q9NSB2 600 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 NTMQ9P121 344 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 MYEF2Q9P2K5 600 aaKnown RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ING1Q9UK53 422 aaPredicted RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PLEKHM1Q9Y4G2 1056 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ATP23Q9Y6H3 246 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 DBX1A6NMT0 343 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SMAD6O43541 496 aaKnown RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PRAMEF11O60813 436 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PRAMEF12O95522 483 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 FBP1P09467 338 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 HIST1H2AGP0C0S8 130 aaPredicted RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 LBPP18428 481 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 GABRB1P18505 474 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 HIST1H2ADP20671 130 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 NPBWR1P48145 328 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 RORCP51449 518 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 INSM1Q01101 510 aaPredicted RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PPIGQ13427 754 aaKnown RBP eCLIP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 TEAD2Q15562 447 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 TAF1AQ15573 450 aaPredicted RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF628Q5EBL2 1059 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 HECTD2Q5U5R9 776 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 KCTD11Q693B1 232 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 HIST2H2AA3Q6FI13 130 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PTRHD1Q6GMV3 140 aaKnown RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 C3P1Q6ZMU1 363 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ANKRD33Q7Z3H0 272 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 GRASPQ7Z6J2 395 aaPredicted RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ISCA2Q86U28 154 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 NR2C2APQ86WQ0 139 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 TGIF2LXQ8IUE1 241 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SERPINA12Q8IW75 414 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 STX19Q8N4C7 294 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 TCEAL3Q969E4 200 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 IMP4Q96G21 291 aaKnown RBP5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 HIST1H2AHQ96KK5 128 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 WDFY2Q96P53 400 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 HIST1H2AJQ99878 128 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 ZNF576Q9H609 170 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SYNDIG1Q9H7V2 258 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 PRDM6Q9NQX0 595 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 C2orf42Q9NWW7 574 aa5.43□□□□□ -1.54
SOX2-OT-218ENST00000498731 SPASTQ9UBP0 616 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms