RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 ZNF836Q6ZNA1 936 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TSEN54Q7Z6J9 526 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TMEM179BQ7Z7N9 219 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RBM45Q8IUH3 476 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 EPHX4Q8IUS5 362 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 C9orf40Q8IXQ3 194 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TAGAPQ8N103 731 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 B3GNT7Q8NFL0 401 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 OR52J3Q8NH60 311 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 C8orf44Q96CB5 159 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 NAF1Q96HR8 494 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 BTBD9Q96Q07 612 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 EPYCQ99645 322 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RBM4BQ9BQ04 359 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 FNDC11Q9BVV2 318 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RBM4Q9BWF3 364 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 WWTR1Q9GZV5 400 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 HOXD1Q9GZZ0 328 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 SAP130Q9H0E3 1048 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 NXF5Q9H1B4 397 aaKnown RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 SMURF2Q9HAU4 748 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RLIMQ9NVW2 624 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 VNN3Q9NY84 501 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 PDP1Q9P0J1 537 aaPredicted RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 KIF17Q9P2E2 1029 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RHCGQ9UBD6 479 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 TMCC3Q9ULS5 477 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 PCDHGA3Q9Y5H0 932 aa6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 MAGED1Q9Y5V3 778 aaPredicted RBP6.58□□□□□ -1.36
GPATCH4-209ENST00000498641 RP1P56715 2156 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 TRBV11-1A0A0K0K1C0 115 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 CDC14CA4D256 554 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 C7orf72A4D263 438 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 CLDN24A6NM45 220 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 C9orf172C9J069 976 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 AP3D1O14617 1153 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 PCDH17O14917 1159 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 FRS3O43559 492 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 HS6ST1O60243 411 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 UGT2B17O75795 530 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 CCNB2O95067 398 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 IL33O95760 270 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 DLGAP3O95886 979 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 HPRP00739 348 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 H1F0P07305 194 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 UMODP07911 640 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 RPSAP08865 295 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 NID1P14543 1247 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 UQCRBP14927 111 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 CSRP1P21291 193 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 RPS4Y1P22090 263 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 IL12BP29460 328 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 ATP12AP54707 1039 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 NRG3P56975 720 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 TAS2R41P59536 307 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 EEF1A1P68104 462 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 RNF4P78317 190 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 IL1RL1Q01638 556 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 PLCXD2Q0VAA5 305 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 MED21Q13503 144 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 EBPQ15125 230 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 MAPK14Q16539 360 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 EXOC3L2Q2M3D2 409 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 FGD3Q5JSP0 725 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 COLEC12Q5KU26 742 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 PDZK1Q5T2W1 519 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 C6orf52Q5T4I8 152 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 MRPL2Q5T653 305 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 WLSQ5T9L3 541 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 TCTN3Q6NUS6 607 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 ZAR1Q86SH2 424 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 COMTD1Q86VU5 262 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 RANBP3LQ86VV4 465 aaPredicted RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 LACC1Q8IV20 430 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 PRR22Q8IZ63 422 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 HS3ST5Q8IZT8 346 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 CLIP4Q8N3C7 705 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 ESX1Q8N693 406 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 ATG16L2Q8NAA4 619 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF527Q8NB42 609 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 PIK3C3Q8NEB9 887 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 NFAM1Q8NET5 270 aaPredicted RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 OR4D11Q8NGI4 311 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 OR5L2Q8NGL0 311 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 OR6T1Q8NGN1 323 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 OR2Y1Q8NGV0 311 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 GIPC3Q8TF64 312 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 PHF10Q8WUB8 498 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 CT55Q8WUE5 264 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 APOBEC4Q8WW27 367 aaKnown RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 CYGBQ8WWM9 190 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 NR4A3Q92570 626 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 ADIPOR1Q96A54 375 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 EFHD2Q96C19 240 aaPredicted RBP6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 HSPBAP1Q96EW2 488 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 NRBF2Q96F24 287 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 VMP1Q96GC9 406 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF597Q96LX8 424 aa6.57□□□□□ -1.36
GPATCH4-209ENST00000498641 ALPK1Q96QP1 1244 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms