RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 FRG2CA6NGY1 282 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 ZNF195O14628 629 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 EPHA3P29320 983 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 RPL3P39023 403 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 SNTA1Q13424 505 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 TOMM20Q15388 145 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 FLYWCH1Q4VC44 716 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 R3HCC1LQ7Z5L2 792 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 SPATA19Q7Z5L4 167 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 C9orf106Q8NAJ2 232 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 CLHC1Q8NHS4 586 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 ACTRT2Q8TDY3 377 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 EXOSC8Q96B26 276 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 ZNF764Q96H86 408 aaPredicted RBP20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 BTBD9Q96Q07 612 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 TRIB1Q96RU8 372 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 OR2B2Q9GZK3 357 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 WDR55Q9H6Y2 383 aaPredicted RBP20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 SLC35C2Q9NQQ7 365 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 RASSF1Q9NS23 344 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 PRODH2Q9UF12 536 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 MAPRE3Q9UPY8 281 aa20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 PRRC2AP48634 2157 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-208ENST00000498124 B4DXG7 233 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 AKAP10O43572 662 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 TBX19O60806 448 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 DIAPH2O60879 1101 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 IL2RAP01589 272 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 G6PDP11413 515 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 HPCAL1P37235 193 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 MDH1P40925 334 aaKnown RBP20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 DCAF7P61962 342 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 GUCY1A3Q02108 690 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 NXNQ6DKJ4 435 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 NPSR1Q6W5P4 371 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 MAVSQ7Z434 540 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 OR9A2Q8NGT5 310 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 RNF138Q8WVD3 245 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 GFM2Q969S9 779 aaKnown RBP20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 TMBIM1Q969X1 311 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 MTERF3Q96E29 417 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 SLC35A4Q96G79 324 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 MAELQ96JY0 434 aaKnown RBP20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 POLDIP3Q9BY77 421 aaKnown RBP20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 CXXC4Q9H2H0 198 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 CLEC4MQ9H2X3 399 aaPredicted RBP20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 CCDC134Q9H6E4 229 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 KLRF1Q9NZS2 232 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 JKAMPQ9P055 326 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 CBLCQ9ULV8 474 aa20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 EXO1Q9UQ84 846 aaKnown RBP20.51■□□□□ 0.87
CDKN2A-208ENST00000498124 GOLGA8QA0A0J9YX86 632 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 GOLGA8OA6NCC3 632 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 OR6C70A6NIJ9 312 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 A6NNC1 897 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 GOLGA8NF8WBI6 632 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 EDF1O60869 148 aaKnown RBP20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 ACTL6AO96019 429 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 CT45A8P0DMV1 189 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 CT45A9P0DMV2 189 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 PEX19P40855 299 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 AGFG1P52594 562 aaKnown RBP20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 CORO7P57737 925 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 PTGR1Q14914 329 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 CEBPEQ15744 281 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 SLC9B1Q4ZJI4 515 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 CT45A2Q5DJT8 189 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 EPGNQ6UW88 154 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 CCDC116Q8IYX3 515 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 FAM222BQ8WU58 562 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 KAT2AQ92830 837 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 NINJ1Q92982 152 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 PPCDCQ96CD2 204 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 VSTM2LQ96N03 204 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 BBS4Q96RK4 519 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 G6PC3Q9BUM1 346 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 CALHM2Q9HA72 323 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 ST6GALNAC2Q9UJ37 374 aa20.5■□□□□ 0.87
CDKN2A-208ENST00000498124 CPN1P15169 458 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 PRPS1L1P21108 318 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 CTSSP25774 331 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 PDE7AQ13946 482 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 SF3B4Q15427 424 aaKnown RBP eCLIP20.49■□□□□ 0.879e-6■■■■□ 20
CDKN2A-208ENST00000498124 ADGRE4PQ86SQ3 457 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 CEP70Q8NHQ1 597 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 ZPLD1Q8TCW7 415 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 ERP27Q96DN0 273 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 COL21A1Q96P44 957 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 FOXC2Q99958 501 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 TUBA1CQ9BQE3 449 aa20.49■□□□□ 0.87
CDKN2A-208ENST00000498124 SCAMP2O15127 329 aaKnown RBP20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 TSPAN2O60636 221 aa20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 NTSP30990 170 aa20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 MPIP34949 423 aa20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 AQP5P55064 265 aa20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 DIO3P55073 304 aa20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 GFRA1P56159 465 aa20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 CLDN8P56748 225 aa20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 C21orf58P58505 322 aa20.48■□□□□ 0.87
CDKN2A-208ENST00000498124 FOXF2Q12947 444 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms