RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 GFM2Q969S9 779 aaKnown RBP14.7□□□□□ -0.06
VIM-208ENST00000497849 GMPPAQ96IJ6 420 aaPredicted RBP14.7□□□□□ -0.06
VIM-208ENST00000497849 BTBD9Q96Q07 612 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 FUT8Q9BYC5 575 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 TRIM2Q9C040 744 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 GRIP2Q9C0E4 1043 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 ALG9Q9H6U8 611 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 PPP4R1LQ9P1A2 415 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 PRODH2Q9UF12 536 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 B3GALT5Q9Y2C3 310 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 DYSFO75923 2080 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 PLCE1Q9P212 2302 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 ELOA3DA6NLF2 546 aaPredicted RBP14.69□□□□□ -0.06
VIM-208ENST00000497849 LINC01387J3KSC0 135 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 UBXN8O00124 270 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 SPRY1O43609 319 aaPredicted RBP14.69□□□□□ -0.06
VIM-208ENST00000497849 IGFBP5P24593 272 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 GP5P40197 560 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 CTBP2P56545 445 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 PHEXP78562 749 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 EFR3AQ14156 821 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 TSC22D1Q15714 1073 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 LTB4RQ15722 352 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 TAB1Q15750 504 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 SGCBQ16585 318 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 CPSF6Q16630 551 aaKnown RBP eCLIP14.69□□□□□ -0.06
VIM-208ENST00000497849 ELOA3BQ3SY89 546 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 SLC48A1Q6P1K1 146 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 SEZ6L2Q6UXD5 910 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 NPSR1Q6W5P4 371 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 IL17RELQ6ZVW7 336 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 LARP4Q71RC2 724 aaKnown RBP eCLIP14.69□□□□□ -0.06
VIM-208ENST00000497849 ISCA2Q86U28 154 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 ELOA3Q8NG57 546 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 OR2W6PQ8NHA6 318 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 ATOH8Q96SQ7 321 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 CPNE1Q99829 537 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 ANKRA2Q9H9E1 313 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 ZBTB26Q9HCK0 441 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 FANCFQ9NPI8 374 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 MED11Q9P086 117 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 TXNDC16Q9P2K2 825 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 PCDHA9Q9Y5H5 950 aa14.69□□□□□ -0.06
VIM-208ENST00000497849 GOLGA6L10A6NI86 522 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 FOXE1O00358 373 aaPredicted RBP14.68□□□□□ -0.06
VIM-208ENST00000497849 SCO2O43819 266 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 LMX1BO60663 402 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 GCM2O75603 506 aaPredicted RBP14.68□□□□□ -0.06
VIM-208ENST00000497849 ERAL1O75616 437 aaKnown RBP14.68□□□□□ -0.06
VIM-208ENST00000497849 SEMA3DO95025 777 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 PLGP00747 810 aaPredicted RBP14.68□□□□□ -0.06
VIM-208ENST00000497849 KLK1P06870 262 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 ABHD2P08910 425 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 IGHV4-31P0DP07 118 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 PCSK2P16519 638 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 CSNK2A2P19784 350 aaPredicted RBP14.68□□□□□ -0.06
VIM-208ENST00000497849 PTNP21246 168 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 GCAP28676 217 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 NUDT6P53370 316 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 PNLIPRP2P54317 469 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 BSPH1Q075Z2 132 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 DLG1Q12959 904 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 ZKSCAN8Q15776 578 aaPredicted RBP14.68□□□□□ -0.06
VIM-208ENST00000497849 NRF1Q16656 503 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 GRTP1Q5TC63 336 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 CYB5R2Q6BCY4 276 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 PPP4R4Q6NUP7 873 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 FAM180BQ6P0A1 224 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 STEAP2Q8NFT2 490 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 STAG3L4Q8TBR4 150 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 EFHD2Q96C19 240 aaPredicted RBP14.68□□□□□ -0.06
VIM-208ENST00000497849 TSPAN17Q96FV3 270 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 RBBP8Q99708 897 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 PRRG4Q9BZD6 226 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 RTN4RQ9BZR6 473 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 ALG2Q9H553 416 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 FOLH1BQ9HBA9 442 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 NSMCE4AQ9NXX6 385 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 AP4B1Q9Y6B7 739 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 MGAM2Q2M2H8 2515 aa14.68□□□□□ -0.06
VIM-208ENST00000497849 HMX2A2RU54 273 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 DPRXA6NFQ7 191 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 SUPT3HB4E1H0 165 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 UBFD1O14562 309 aaKnown RBP14.67□□□□□ -0.06
VIM-208ENST00000497849 SUPT3HO75486 399 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 MTHFD2P13995 350 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 STMN1P16949 149 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 IL12BP29460 328 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 EVI2BP34910 448 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 EIF1AXP47813 144 aaKnown RBP14.67□□□□□ -0.06
VIM-208ENST00000497849 PIK3CGP48736 1102 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 IRX1P78414 480 aaPredicted RBP14.67□□□□□ -0.06
VIM-208ENST00000497849 GANABQ14697 944 aaKnown RBP14.67□□□□□ -0.06
VIM-208ENST00000497849 MFSD12Q6NUT3 480 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 FIGNL1Q6PIW4 674 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 HDXQ7Z353 690 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 ZNF619Q8N2I2 560 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 MREGQ8N565 214 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 OR4N2Q8NGD1 307 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 DCAKDQ8WVC6 231 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms