RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 OR1F12Q8NHA8 337 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 SCARB1Q8WTV0 552 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 NRGNQ92686 78 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 RAB1CQ92928 201 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 UPRTQ96BW1 309 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 C10orf35Q96D05 121 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ABHD8Q96I13 439 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 C4orf45Q96LM5 186 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 MTMR9Q96QG7 549 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 NEURL2Q9BR09 285 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 C20orf24Q9BUV8 137 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 OR2B2Q9GZK3 357 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 IL22Q9GZX6 179 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 MTHFD2LQ9H903 347 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 PELI2Q9HAT8 420 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 MRPS30Q9NP92 439 aaKnown RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 SDR39U1Q9NRG7 319 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ECHDC1Q9NTX5 307 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ASB6Q9NWX5 421 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 GPR83Q9NYM4 423 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ABCG2Q9UNQ0 655 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 MEMO1Q9Y316 297 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 COL14A1Q05707 1796 aaKnown RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 KTN1Q86UP2 1357 aaKnown RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 MYOM1P52179 1685 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 LMO7Q8WWI1 1683 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 CAMTA1Q9Y6Y1 1673 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 LOC390937A0A1W2PQ73 354 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 SMCO3A2RU48 225 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 FBLL1A6NHQ2 334 aaKnown RBP5.4□□□□□ -1.54
BRCA1-224ENST00000497488 MID1O15344 667 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 NXPH2O95156 264 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 GCP02774 474 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ERCC1P07992 297 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-224ENST00000497488 IGHV4-30-4P0DP06 118 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 TNNI1P19237 187 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 CFPP27918 469 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 UGT1A5P35504 534 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 AHRP35869 848 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 NDST2P52849 883 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 OTUD4Q01804 1114 aaKnown RBP5.4□□□□□ -1.54
BRCA1-224ENST00000497488 EWSR1Q01844 656 aaKnown RBP eCLIP5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ID2Q02363 134 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF91Q05481 1191 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ASPHQ12797 758 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ZP4Q12836 540 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ILKQ13418 452 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 COTL1Q14019 142 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 AANATQ16613 207 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 CELF3Q5SZQ8 465 aaKnown RBP5.4□□□□□ -1.54
BRCA1-224ENST00000497488 SLC25A25Q6KCM7 469 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 FAM71F2Q6NXP2 309 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ASB18Q6ZVZ8 466 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 RFPL4BQ6ZWI9 263 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 VRK2Q86Y07 508 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 TBC1D10CQ8IV04 446 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 PQLC3Q8N755 202 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 MAPKAPK5-AS1Q8N8E1 139 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 C7orf57Q8NEG2 295 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 OR2L3Q8NG85 312 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF596Q8TC21 504 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 HSD17B8Q92506 261 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 ADIPOR1Q96A54 375 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 LMLNQ96KR4 655 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 C3orf30Q96M34 536 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 NEDD4LQ96PU5 975 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 TEKT3Q9BXF9 490 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 GOLGA2P5Q9HBQ8 144 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 S100A14Q9HCY8 104 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 IL26Q9NPH9 171 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 C20orf96Q9NUD7 363 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-224ENST00000497488 NUDT15Q9NV35 164 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 C2orf42Q9NWW7 574 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 MTCH1Q9NZJ7 389 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 PITPNC1Q9UKF7 332 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 IKZF3Q9UKT9 509 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 POLDIP2Q9Y2S7 368 aa5.4□□□□□ -1.54
BRCA1-224ENST00000497488 COL4A3Q01955 1670 aa5.4□□□□□ -1.55
BRCA1-224ENST00000497488 BRD4O60885 1362 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-224ENST00000497488 KAT6AQ92794 2004 aa5.4□□□□□ -1.55
BRCA1-224ENST00000497488 NFAT5O94916 1531 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 A0A1W2PPE3 182 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 ZNF840PA6NDX5 716 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 WWP2O00308 870 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 FPGTO14772 594 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 GLRA3O75311 464 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 CABYRO75952 493 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 B3GAT3O94766 335 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 CALCAP01258 141 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 IGF1P05019 195 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 IGFBP1P08833 259 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 IGHV4-31P0DP07 118 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 UMPSP11172 480 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 MBL2P11226 248 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 ANXA3P12429 323 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 ATP1B2P14415 290 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 C21orf33P30042 268 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-224ENST00000497488 RORAP35398 523 aa5.39□□□□□ -1.55
BRCA1-224ENST00000497488 HTR2BP41595 481 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms