RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 TRIM15Q9C019 465 aa12.86□□□□□ -0.35
ATPAF2-208ENST00000496852 ZNF552Q9H707 407 aaPredicted RBP12.86□□□□□ -0.35
ATPAF2-208ENST00000496852 BCL2L10Q9HD36 194 aa12.86□□□□□ -0.35
ATPAF2-208ENST00000496852 POLE3Q9NRF9 147 aa12.86□□□□□ -0.35
ATPAF2-208ENST00000496852 CALML5Q9NZT1 146 aa12.86□□□□□ -0.35
ATPAF2-208ENST00000496852 MRTO4Q9UKD2 239 aaKnown RBP12.86□□□□□ -0.35
ATPAF2-208ENST00000496852 SNX13Q9Y5W8 968 aa12.86□□□□□ -0.35
ATPAF2-208ENST00000496852 DSPPQ9NZW4 1301 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 A6NL46 340 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 CXCR6O00574 342 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 ARPC2O15144 300 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 GCM2O75603 506 aaPredicted RBP12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 REM1O75628 298 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 PPM1BO75688 479 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 PGM3O95394 542 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 FBXO45P0C2W1 286 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 GGT1P19440 569 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 SOX3P41225 446 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 RFX3P48380 749 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 SSR4P51571 173 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 PSMD4P55036 377 aaKnown RBP12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 CHRNEQ04844 493 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 RPS26P11Q5JNZ5 115 aaPredicted RBP12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 BBS10Q8TAM1 723 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 SLC26A7Q8TE54 656 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 STMN2Q93045 179 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 RSRC1Q96IZ7 334 aaKnown RBP12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 NSMCE2Q96MF7 247 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 GPR83Q9NYM4 423 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 TEKT2Q9UIF3 430 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 MAGEL2Q9UJ55 1249 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 MKLN1Q9UL63 735 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 ANGPT4Q9Y264 503 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 WDR45Q9Y484 360 aa12.85□□□□□ -0.35
ATPAF2-208ENST00000496852 A0A0G2JPF8 293 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 HNRNPCL2B2RXH8 293 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 HNRNPCL3B7ZW38 293 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 KIAA0513O60268 411 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 ENTPD5O75356 428 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 ALPPP05187 535 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 HNRNPCL4P0DMR1 293 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 IL12BP29460 328 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 AQP1P29972 269 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 KRT20P35900 424 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 TMED10P49755 219 aaKnown RBP12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 HPCAP84074 193 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 RAPSNQ13702 412 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 NTRK2Q16620 822 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 ZNF791Q3KP31 576 aaPredicted RBP12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 ABHD17BQ5VST6 288 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 AGAP7PQ5VUJ5 663 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 DESI1Q6ICB0 168 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 OPN5Q6U736 354 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 CCDC80Q76M96 950 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 BEST3Q8N1M1 668 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 ZNF619Q8N2I2 560 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 FDCSPQ8NFU4 85 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 APOBEC4Q8WW27 367 aaKnown RBP12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 SPACA9Q96E40 222 aaPredicted RBP12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 AGAP4Q96P64 663 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 ADOQ96SZ5 270 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 PCDHGA10Q9Y5H3 936 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 V9GYQ6 96 aa12.84□□□□□ -0.35
ATPAF2-208ENST00000496852 LAMA5O15230 3695 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 NPIPB9F8W1W9 429 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ACOT8O14734 319 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ABCB7O75027 752 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 UGT2B11O75310 529 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 OR6B1O95007 311 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 FREM3P0C091 2139 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 CYP4B1P13584 511 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ETS2P15036 469 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ATP6V1B2P21281 511 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ATP6V1C1P21283 382 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 LCN1P31025 176 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ST13P50502 369 aaKnown RBP12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 CRYBA2P53672 197 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 FBXW4P57775 412 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ACTR3P61158 418 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 CXADRP78310 365 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 GPR68Q15743 365 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 LRRC23Q53EV4 343 aaPredicted RBP12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 INTS11Q5TA45 600 aaKnown RBP12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ZNF468Q5VIY5 522 aaPredicted RBP12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ISLR2Q6UXK2 745 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 DND1Q8IYX4 353 aaKnown RBP12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 TMEM156Q8N614 296 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ASB15Q8WXK1 588 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 PMM1Q92871 262 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 HGDQ93099 445 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 COL21A1Q96P44 957 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 MUC13Q9H3R2 512 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ZBTB20Q9HC78 741 aaPredicted RBP12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 ACTR3BQ9P1U1 418 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 KCNE5Q9UJ90 142 aa12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 GPC6Q9Y625 555 aaPredicted RBP12.83□□□□□ -0.35
ATPAF2-208ENST00000496852 NCKAP5O14513 1909 aa12.83□□□□□ -0.36
ATPAF2-208ENST00000496852 NPIPA5A0A0B4J1W7 369 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms