RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PIK3R3Q92569 461 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 SFXN3Q9BWM7 321 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 IQCGQ9H095 443 aaKnown RBP12.92□□□□□ -0.34
VTI1A-209ENST00000496445 REEP4Q9H6H4 257 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 RASSF1Q9NS23 344 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 MED11Q9P086 117 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 GIMAP2Q9UG22 337 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 BAIAP2L1Q9UHR4 511 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 FOXD3Q9UJU5 478 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-209ENST00000496445 SETD2Q9BYW2 2564 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-209ENST00000496445 MPDZO75970 2070 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 A6NNC1 897 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 PIP5K1BO14986 540 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 TGM6O95932 706 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 CREB1P16220 341 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 RFX3P48380 749 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 CLDN15P56746 228 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 ZNHIT3Q15649 155 aaPredicted RBP12.91□□□□□ -0.34
VTI1A-209ENST00000496445 XKR7Q5GH72 579 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 ARL13AQ5H913 290 aaPredicted RBP12.91□□□□□ -0.34
VTI1A-209ENST00000496445 APOOLQ6UXV4 268 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 ZCCHC23Q6ZST2 131 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 GCNT2Q8N0V5 402 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 FBXO30Q8TB52 745 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 TCP10LQ8TDR4 215 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 FAM222BQ8WU58 562 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 WNT2BQ93097 391 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 DTNBP1Q96EV8 351 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 LRRC46Q96FV0 321 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 ZFP3Q96NJ6 502 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 CLEC4MQ9H2X3 399 aaPredicted RBP12.91□□□□□ -0.34
VTI1A-209ENST00000496445 LIME1Q9H400 295 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 NTMQ9P121 344 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 TMED5Q9Y3A6 229 aa12.91□□□□□ -0.34
VTI1A-209ENST00000496445 PRRC2AP48634 2157 aaKnown RBP12.91□□□□□ -0.34
VTI1A-209ENST00000496445 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 H0YC42 278 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 TNFSF13O75888 250 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 NKX2-2O95096 273 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 UTS2O95399 124 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 CHEK2O96017 543 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 FGF4P08620 206 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 ACP2P11117 423 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 PRPS2P11908 318 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 BCKDHAP12694 445 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 HK1P19367 917 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 GABRA3P34903 492 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 GPC1P35052 558 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 TPD52P55327 224 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-209ENST00000496445 SORDQ00796 357 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 GANABQ14697 944 aaKnown RBP12.9□□□□□ -0.34
VTI1A-209ENST00000496445 GRAMD1BQ3KR37 738 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 EXOSC6Q5RKV6 272 aaKnown RBP12.9□□□□□ -0.34
VTI1A-209ENST00000496445 RAET1LQ5VY80 246 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 MARCH3Q86UD3 253 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 DDIASQ8IXT1 998 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 NUP43Q8NFH3 380 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 OR5M1Q8NGP8 315 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 INTS12Q96CB8 462 aaKnown RBP12.9□□□□□ -0.34
VTI1A-209ENST00000496445 PPCDCQ96CD2 204 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 C1GALT1C1Q96EU7 318 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 RMND5BQ96G75 393 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-209ENST00000496445 MS4A4EQ96PG1 132 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 TM9SF2Q99805 663 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 POLDIP3Q9BY77 421 aaKnown RBP12.9□□□□□ -0.34
VTI1A-209ENST00000496445 SIRT3Q9NTG7 399 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-209ENST00000496445 TRAF6Q9Y4K3 522 aa12.9□□□□□ -0.34
VTI1A-209ENST00000496445 IGLV3-32A0A0A0MS00 114 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 TTC36A6NLP5 189 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 KCNH1O95259 989 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 EFNA1P20827 205 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-209ENST00000496445 ART1P52961 327 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 SUCLG1P53597 346 aaKnown RBP12.89□□□□□ -0.35
VTI1A-209ENST00000496445 IST1P53990 364 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 PSMD4P55036 377 aaKnown RBP12.89□□□□□ -0.35
VTI1A-209ENST00000496445 MANFP55145 182 aaKnown RBP12.89□□□□□ -0.35
VTI1A-209ENST00000496445 PRR5P85299 388 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 ZAR1Q86SH2 424 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 GALNT10Q86SR1 603 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 LUZP2Q86TE4 346 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 EXOC3L1Q86VI1 746 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 GRAMD2AQ8IUY3 354 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 UBQLNLQ8IYU4 475 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 CDRT4Q8N9R6 151 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 ZFP28Q8NHY6 868 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 LINC01560Q8TB33 94 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 AGR3Q8TD06 166 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 GPR151Q8TDV0 419 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 DUSP19Q8WTR2 217 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 ZBED6CLQ96FA7 236 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-209ENST00000496445 C3orf30Q96M34 536 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 RBM24Q9BX46 236 aaKnown RBP12.89□□□□□ -0.35
VTI1A-209ENST00000496445 C3orf14Q9HBI5 128 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 ACSS1Q9NUB1 689 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-209ENST00000496445 GALNT8Q9NY28 637 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 SH3BP4Q9P0V3 963 aa12.89□□□□□ -0.35
VTI1A-209ENST00000496445 MRTO4Q9UKD2 239 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms