RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 DBIP07108 87 aaKnown RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 TSPAN19P0C672 248 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 ETV5P41161 510 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 ETV1P50549 477 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 DEFA1P59665 94 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 DEFA3P59666 94 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 SNRPNP63162 240 aaKnown RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 HOXC5Q00444 222 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 BNC1Q01954 994 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 DOC2BQ14184 412 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 KIR2DS5Q14953 304 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 GPR68Q15743 365 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 TRMT12Q53H54 448 aaKnown RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 TMEM31Q5JXX7 168 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 STEAP3Q658P3 488 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 PAQR6Q6TCH4 344 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 RNF44Q7L0R7 432 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 CCDC190Q86UF4 302 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 LAPTM4BQ86VI4 370 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 NRMQ8IXM6 262 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 ZNF619Q8N2I2 560 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 CDRT4Q8N9R6 151 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 POC5Q8NA72 575 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 OR8D4Q8NGM9 314 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 GPBAR1Q8TDU6 330 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 STACQ99469 402 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 KCNS3Q9BQ31 491 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 ZNF350Q9GZX5 532 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 POLMQ9NP87 494 aaPredicted RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 ISYNA1Q9NPH2 558 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 DUSP22Q9NRW4 184 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 HRASLS2Q9NWW9 162 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 GPR52Q9Y2T5 361 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 PCDHGB6Q9Y5F9 930 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 LRP4O75096 1905 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 ZNF860A6NHJ4 632 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 KDM4EB2RXH2 506 aaPredicted RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 PLOD3O60568 738 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 LDB3O75112 727 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 PTTG1O95997 202 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 AK1P00568 194 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 GNSP15586 552 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 GABRG2P18507 467 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 NT5EP21589 574 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 RPS19P39019 145 aaKnown RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 SEPHS1P49903 392 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 CDH11P55287 796 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 COPZ1P61923 177 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 EEF1A1P68104 462 aaKnown RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 MAP4K2Q12851 820 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 DCST2Q5T1A1 773 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 C11orf74Q86VG3 221 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 OOSP2Q86WS3 158 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 MEX3DQ86XN8 651 aaKnown RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 COX18Q8N8Q8 333 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 OR2T33Q8NG76 320 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 OR13H1Q8NG92 308 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 TMEM255BQ8WV15 326 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 NELL2Q99435 816 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 SLC30A2Q9BRI3 323 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 POLE4Q9NR33 117 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 MMP17Q9ULZ9 603 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 SLC7A7Q9UM01 511 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 CLCA2Q9UQC9 943 aa10.33□□□□□ -0.76
CMSS1-208ENST00000496116 SPIN1Q9Y657 262 aaPredicted RBP10.33□□□□□ -0.76
CMSS1-208ENST00000496116 STK25O00506 426 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 SURF4O15260 269 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 RGS5O15539 181 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 DNAJB6O75190 326 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 GPR75O95800 540 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 HMGN1P05114 100 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 IFI6P09912 130 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 GPR4P46093 362 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 UBE2IP63279 158 aaKnown RBP10.32□□□□□ -0.76
CMSS1-208ENST00000496116 ID2Q02363 134 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 SLC13A2Q13183 592 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 CCNJQ5T5M9 372 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 FHL5Q5TD97 284 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 SLC30A6Q6NXT4 461 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 ZNF620Q6ZNG0 422 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 ABI3BPQ7Z7G0 1075 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 CADM3Q8N126 398 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 CSNK1A1LQ8N752 337 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 CLDN22Q8N7P3 220 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 HMGB4Q8WW32 186 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 PATE1Q8WXA2 126 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 PMM1Q92871 262 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 UFD1Q92890 307 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 CCDC3Q9BQI4 270 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 CCDC32Q9BV29 185 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 SMURF1Q9HCE7 757 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 H2AFY2Q9P0M6 372 aaPredicted RBP10.32□□□□□ -0.76
CMSS1-208ENST00000496116 CD207Q9UJ71 328 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 CDH10Q9Y6N8 788 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 COL4A2P08572 1712 aa10.32□□□□□ -0.76
CMSS1-208ENST00000496116 TRAPPC13A5PLN9 417 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 WWP2O00308 870 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 CTDSP2O14595 271 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 KLF4O43474 513 aa10.31□□□□□ -0.76
CMSS1-208ENST00000496116 FGF17O60258 216 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms