RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 TRA2AQ13595 282 aaKnown RBP eCLIP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 SEC23BQ15437 767 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 ELAVL1Q15717 326 aaKnown RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 NKAIN1Q4KMZ8 207 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 DCST1Q5T197 706 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 THAP5Q7Z6K1 395 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 C7orf57Q8NEG2 295 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 STT3BQ8TCJ2 826 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 FNDC11Q9BVV2 318 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 ITPAQ9BY32 194 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CTPS2Q9NRF8 586 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 PAPOLBQ9NRJ5 636 aaKnown RBP15.19■□□□□ 0.02
HLA-A-208ENST00000496081 FAM86C1Q9NVL1 165 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 PRODH2Q9UF12 536 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 TMCC3Q9ULS5 477 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 CLCA3PQ9Y6N3 262 aa15.19■□□□□ 0.02
HLA-A-208ENST00000496081 RALGAPA1Q6GYQ0 2036 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 COL5A1P20908 1838 aaPredicted RBP15.18■□□□□ 0.02
HLA-A-208ENST00000496081 A0A1W2PRQ8 180 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 EFCAB7A8K855 629 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 BCKDKO14874 412 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 GDF9O60383 454 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 SMNDC1O75940 238 aaKnown RBP eCLIP15.18■□□□□ 0.02
HLA-A-208ENST00000496081 GASTP01350 101 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 GUSBP08236 651 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 FGF5P12034 268 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 NID1P14543 1247 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 RFX3P48380 749 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 IL18R1Q13478 541 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 DGCR6Q14129 220 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 LIN52Q52LA3 116 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF691Q5VV52 312 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF385CQ66K41 422 aaPredicted RBP15.18■□□□□ 0.02
HLA-A-208ENST00000496081 AQP11Q8NBQ7 271 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 PLPP5Q8NEB5 264 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 SLC7A13Q8TCU3 470 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 GABARAPL3Q9BY60 117 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 Q9N2J8 555 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 MAN2C1Q9NTJ4 1040 aa15.18■□□□□ 0.02
HLA-A-208ENST00000496081 TTC36A6NLP5 189 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 E9PQ18 207 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 DYRK3O43781 588 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 OXSR1O95747 527 aaPredicted RBP15.17■□□□□ 0.02
HLA-A-208ENST00000496081 DDAH2O95865 285 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 IGKV3-11P04433 115 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 HBQ1P09105 142 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 TPD52P55327 224 aaPredicted RBP15.17■□□□□ 0.02
HLA-A-208ENST00000496081 RGS8P57771 180 aaPredicted RBP15.17■□□□□ 0.02
HLA-A-208ENST00000496081 FOXL2P58012 376 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 DCDP81605 110 aaKnown RBP15.17■□□□□ 0.02
HLA-A-208ENST00000496081 HOXC5Q00444 222 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 RAPSNQ13702 412 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 KEAP1Q14145 624 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 NNATQ16517 81 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 FLYWCH1Q4VC44 716 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 EIPR1Q53HC9 387 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 LAIR1Q6GTX8 287 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 SHISA6Q6ZSJ9 500 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 BPHLQ86WA6 291 aaPredicted RBP15.17■□□□□ 0.02
HLA-A-208ENST00000496081 BMPERQ8N8U9 685 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 ZSCAN1Q8NBB4 408 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 SLC2A12Q8TD20 617 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF721Q8TF20 911 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 PRRX2Q99811 253 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 CTRCQ99895 268 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 OR8D2Q9GZM6 311 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 NDRG4Q9ULP0 352 aaKnown RBP15.17■□□□□ 0.02
HLA-A-208ENST00000496081 POFUT2Q9Y2G5 429 aa15.17■□□□□ 0.02
HLA-A-208ENST00000496081 FAAHO00519 579 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 CDX4O14627 284 aaPredicted RBP15.16■□□□□ 0.02
HLA-A-208ENST00000496081 ONECUT2O95948 504 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 ZGLP1P0C6A0 271 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 POU2F1P14859 743 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 ELK4P28324 431 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 ISL1P61371 349 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 CD47Q08722 323 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 APOFQ13790 326 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 IL11RAQ14626 422 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 SF3A2Q15428 464 aaKnown RBP15.16■□□□□ 0.02
HLA-A-208ENST00000496081 KCTD21Q4G0X4 260 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 MRPL2Q5T653 305 aaKnown RBP15.16■□□□□ 0.02
HLA-A-208ENST00000496081 RNF220Q5VTB9 566 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 AGBL5Q8NDL9 886 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 DIO2Q92813 273 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 GTPBP3Q969Y2 492 aaKnown RBP15.16■□□□□ 0.02
HLA-A-208ENST00000496081 FKBP10Q96AY3 582 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 ING2Q9H160 280 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF556Q9HAH1 456 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 SH3PXD2BA1X283 911 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 CDHR4A6H8M9 788 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 TRIM64A6NGJ6 449 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 CPSF4LA6NMK7 179 aaKnown RBP15.16■□□□□ 0.02
HLA-A-208ENST00000496081 CCNYL3P0C7X3 344 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 CD59P13987 128 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 RYKP34925 604 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 RNF144AP50876 292 aaPredicted RBP15.16■□□□□ 0.02
HLA-A-208ENST00000496081 ZNF136P52737 540 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 TAS2R41P59536 307 aa15.16■□□□□ 0.02
HLA-A-208ENST00000496081 RPP38P78345 283 aaKnown RBP15.16■□□□□ 0.02
HLA-A-208ENST00000496081 OCA2Q04671 838 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms