RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 MAP3K3Q99759 626 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 G6PC3Q9BUM1 346 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 DUSP23Q9BVJ7 150 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 RBCK1Q9BYM8 510 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 CNTNAP3Q9BZ76 1288 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 FOXQ1Q9C009 403 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 SLC7A5P2Q9GIP4 190 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 NDEL1Q9GZM8 345 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 LHPPQ9H008 270 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 SLC38A1Q9H2H9 487 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 DUSP21Q9H596 190 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 GPN2Q9H9Y4 310 aaPredicted RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 IL21RQ9HBE5 538 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 Q9N2J8 555 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 NECTIN3Q9NQS3 549 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 TBC1D23Q9NUY8 699 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 CHCHD3Q9NX63 227 aaKnown RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 NLGN3Q9NZ94 848 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 MAT2BQ9NZL9 334 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 RHCGQ9UBD6 479 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 RPS6KB2Q9UBS0 482 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 PRODH2Q9UF12 536 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 RPL36Q9Y3U8 105 aaKnown RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 MMACHCQ9Y4U1 282 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 ZFHX4Q86UP3 3567 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 ANKRD11Q6UB99 2663 aaPredicted RBP6.46□□□□□ -1.38
USP39-219ENST00000496047 CFAP54Q96N23 3096 aa6.46□□□□□ -1.38
USP39-219ENST00000496047 GON4LQ3T8J9 2241 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CCDC163A0A0D9SF12 145 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 TRBV4-1A0A0J9YWV2 114 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 KRBA1A5PL33 1030 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 TRAPPC13A5PLN9 417 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CPSF4LA6NMK7 179 aaKnown RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 SGK494L7N484 410 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 MYL12BO14950 172 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 BCAT2O15382 392 aaPredicted RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 ZNF749O43361 778 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CHST10O43529 356 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 NUDT21O43809 227 aaKnown RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 KIAA0513O60268 411 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 PCDHGA12O60330 932 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 FMO6PO60774 539 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 B4GALT2O60909 372 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CTNSO60931 367 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CYP7B1O75881 506 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 GASTP01350 101 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 IFNA16P05015 189 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CDK1P06493 297 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 GUSBP08236 651 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ACP2P11117 423 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 TNNI3P19429 210 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CHMP24386 653 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 SLC5A2P31639 672 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 GALNSP34059 522 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CNR2P34972 360 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 POLR2IP36954 125 aaKnown RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 STAT5AP42229 794 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 GPR3P46089 330 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 MAN2A2P49641 1150 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 CLK1P49759 484 aaKnown RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 PDX1P52945 283 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 HSD17B7P56937 341 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 SNRPGP62308 76 aaKnown RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 CHRNEQ04844 493 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DUSP2Q05923 314 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 FUT5Q11128 374 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 MAP4K2Q12851 820 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 TSPAN31Q12999 210 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DCTN2Q13561 401 aaKnown RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
USP39-219ENST00000496047 GPR68Q15743 365 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DECR1Q16698 335 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DGUOKQ16854 277 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 PRTGQ2VWP7 1150 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DEFB133Q30KQ1 61 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 FLYWCH1Q4VC44 716 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 KLHL22Q53GT1 634 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 SAMD5Q5TGI4 173 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 LYSMD4Q5XG99 296 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ANKRD34AQ69YU3 496 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 C1orf94Q6P1W5 598 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 PGBD2Q6P3X8 592 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 PODNL1Q6PEZ8 512 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 FRRS1Q6ZNA5 592 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 LRRC69Q6ZNQ3 347 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ZNF550Q7Z398 422 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 RABEPKQ7Z6M1 372 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ADCK1Q86TW2 530 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 VRK2Q86Y07 508 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 OR4N5Q8IXE1 308 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ZNF440Q8IYI8 595 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DNAJC22Q8N4W6 341 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 DEFB119Q8N690 84 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 ZNF527Q8NB42 609 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 KBTBD8Q8NFY9 601 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 OR6T1Q8NGN1 323 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 OR9A4Q8NGU2 314 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 RHOXF1Q8NHV9 184 aa6.45□□□□□ -1.38
USP39-219ENST00000496047 APOBEC4Q8WW27 367 aaKnown RBP6.45□□□□□ -1.38
USP39-219ENST00000496047 ACOT11Q8WXI4 607 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms