RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 FBP2O00757 339 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 ICOSLGO75144 302 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 STX11O75558 287 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 UNC5CO95185 931 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 UTS2O95399 124 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 IGKV1D-16P01601 117 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 GUSBP08236 651 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 EVI2BP34910 448 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 MASP1P48740 699 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 DNASE1L1P49184 302 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 DSTNP60981 165 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 GNA13Q14344 377 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 RGNQ15493 299 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 INPP5JQ15735 1006 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-235ENST00000495515 COLEC12Q5KU26 742 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 CCNJQ5T5M9 372 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 HEPHL1Q6MZM0 1159 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 MSRB3Q8IXL7 192 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 ZNF527Q8NB42 609 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 ZFP62Q8NB50 900 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-235ENST00000495515 ROPN1LQ96C74 230 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 DTNBP1Q96EV8 351 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 ZNF597Q96LX8 424 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 ANKRD27Q96NW4 1050 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 SDF2Q99470 211 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 TBL1XR1Q9BZK7 514 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 EFCAB1Q9HAE3 211 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 UBQLN4Q9NRR5 601 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 DEPPQ9NTK1 212 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 P2RX2Q9UBL9 471 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 B4GALT7Q9UBV7 327 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 KCNE3Q9Y6H6 103 aa15.68■□□□□ 0.1
HDAC6-235ENST00000495515 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.68■□□□□ 0.1
HDAC6-235ENST00000495515 SCDO00767 359 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 NGFRP08138 427 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 NR2F1P10589 423 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 ETFAP13804 333 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 ZNF24P17028 368 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 MVDP53602 400 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 ALDH6A1Q02252 535 aaKnown RBP15.67■□□□□ 0.1
HDAC6-235ENST00000495515 FLYWCH1Q4VC44 716 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 GPAT3Q53EU6 434 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 RUNDC3AQ59EK9 446 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 COX20Q5RI15 118 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 DESI1Q6ICB0 168 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 PRICKLE2Q7Z3G6 844 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 SLC22A16Q86VW1 577 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 TREML1Q86YW5 311 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 POU5F2Q8N7G0 328 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 CPT1CQ8TCG5 803 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 GRHL3Q8TE85 626 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 LRRC58Q96CX6 371 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 SNRNP40Q96DI7 357 aaKnown RBP15.67■□□□□ 0.1
HDAC6-235ENST00000495515 TMEM41AQ96HV5 264 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 FRMD6Q96NE9 622 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 TRNT1Q96Q11 434 aaKnown RBP15.67■□□□□ 0.1
HDAC6-235ENST00000495515 THUMPD3Q9BV44 507 aaKnown RBP15.67■□□□□ 0.1
HDAC6-235ENST00000495515 ZFP64Q9NPA5 681 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 CALML5Q9NZT1 146 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 WDR45Q9Y484 360 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 COL6A6A6NMZ7 2263 aa15.67■□□□□ 0.1
HDAC6-235ENST00000495515 NUP214P35658 2090 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-235ENST00000495515 FADS1O60427 444 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 GPX2P18283 190 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 TBXA2RP21731 343 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 ELAVL4P26378 380 aaKnown RBP15.66■□□□□ 0.1
HDAC6-235ENST00000495515 ART3Q13508 389 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 FAM91A1Q658Y4 838 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 BICRALQ6AI39 1079 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 GALNT10Q86SR1 603 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 RNF138Q8WVD3 245 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 FAR1Q8WVX9 515 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 OIT3Q8WWZ8 545 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 PMM1Q92871 262 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 RCN3Q96D15 328 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 JSRP1Q96MG2 331 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-235ENST00000495515 TAAR6Q96RI8 345 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 CPPED1Q9BRF8 314 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-235ENST00000495515 ZNF350Q9GZX5 532 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 OLAHQ9NV23 265 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 TUBA8Q9NY65 449 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-235ENST00000495515 WIF1Q9Y5W5 379 aa15.66■□□□□ 0.1
HDAC6-235ENST00000495515 C15orf38-AP3S2A0A0A6YYH1 394 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 A0A0G2JMM0 328 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 A0A1W2PPB8 328 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 A0A1W2PRS3 328 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 KIR3DP1A8MWS1 328 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 ALG1L2C9J202 215 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 H3BNH8 94 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 AIM2O14862 343 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 TFECO14948 347 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-235ENST00000495515 SCO2O43819 266 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 SLC28A2O43868 658 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 TRIM3O75382 744 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-235ENST00000495515 OXSR1O95747 527 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-235ENST00000495515 C1QCP02747 245 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 BMP2P12643 396 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 ENDOUP21128 410 aaKnown RBP15.65■□□□□ 0.1
HDAC6-235ENST00000495515 DCTP40126 519 aa15.65■□□□□ 0.1
HDAC6-235ENST00000495515 CRISP3P54108 245 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms