RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 UBE2V2Q15819 145 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 CYBRD1Q53TN4 286 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 LDLRAP1Q5SW96 308 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 SLX4IPQ5VYV7 408 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 HACD2Q6Y1H2 254 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 TIFABQ6ZNK6 161 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 PARGQ86W56 976 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 CCDC36Q8IYA8 594 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 CADM2Q8N3J6 435 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 MRPL43Q8N983 215 aaKnown RBP2.47□□□□□ -2.01
VPS50-219ENST00000495039 OR56B1Q8NGI3 324 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 SLC25A36Q96CQ1 311 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 ELMO2Q96JJ3 720 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 MAPKAP1Q9BPZ7 522 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 IKZF5Q9H5V7 419 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 KAT8Q9H7Z6 458 aaKnown RBP2.47□□□□□ -2.01
VPS50-219ENST00000495039 MIEF1Q9NQG6 463 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 P2RX2Q9UBL9 471 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 SLC2A6Q9UGQ3 507 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 EXOSC1Q9Y3B2 195 aaKnown RBP2.47□□□□□ -2.01
VPS50-219ENST00000495039 GPRASP1Q5JY77 1395 aa2.47□□□□□ -2.01
VPS50-219ENST00000495039 CUX2O14529 1486 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 FRG2CA6NGY1 282 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 FBLL1A6NHQ2 334 aaKnown RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 RASGRF2O14827 1237 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 CASKO14936 926 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 PPIHO43447 177 aaKnown RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 RAMP1O60894 148 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 TGFAP01135 160 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 GSTT2P0CG29 244 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 GSTT2BP0CG30 244 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 IL2RGP31785 369 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 CDH5P33151 784 aaPredicted RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 ASMTP46597 345 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 ZNF133P52736 654 aaPredicted RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 FUT7Q11130 342 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 KARSQ15046 597 aaKnown RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 CYP51A1Q16850 503 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 GLYR1Q49A26 553 aaPredicted RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 TOR1AIP1Q5JTV8 583 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 IRGCQ6NXR0 463 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 RBM43Q6ZSC3 357 aaKnown RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 LPCAT2Q7L5N7 544 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 GPR137CQ8N3F9 429 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 HDDC3Q8N4P3 179 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 OR8H1Q8NGG4 311 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 GIPC3Q8TF64 312 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 FAF2Q96CS3 445 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 C14orf79Q96F83 325 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 VSIG2Q96IQ7 327 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 SAMD8Q96LT4 415 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 FAM111AQ96PZ2 611 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 CTRCQ99895 268 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 TSSK1BQ9BXA7 367 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 ROPN1Q9HAT0 212 aaPredicted RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 MEPEQ9NQ76 525 aaPredicted RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 TRPV5Q9NQA5 729 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 SOHLH2Q9NX45 425 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 NINJ2Q9NZG7 142 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 HOOK1Q9UJC3 728 aaKnown RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 KLHL21Q9UJP4 597 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 DUSP12Q9UNI6 340 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 MOKQ9UQ07 419 aa2.46□□□□□ -2.02
VPS50-219ENST00000495039 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.46□□□□□ -2.02
VPS50-219ENST00000495039 ABCC4O15439 1325 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 IGLV8-61A0A075B6I0 122 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 KRT87PA6NCN2 255 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 WASHC1A8K0Z3 465 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 WASH3PC4AMC7 463 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 TM9SF1O15321 606 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 ANXA4P09525 319 aaPredicted RBP2.45□□□□□ -2.02
VPS50-219ENST00000495039 P0C879 139 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 RRASP10301 218 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 ARF4P18085 180 aaPredicted RBP2.45□□□□□ -2.02
VPS50-219ENST00000495039 IL10P22301 178 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 IGHV1-2P23083 117 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 NF2P35240 595 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 RABIFP47224 123 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 CDC37Q16543 378 aaPredicted RBP2.45□□□□□ -2.02
VPS50-219ENST00000495039 PAGE2BQ5JRK9 111 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 CELF3Q5SZQ8 465 aaKnown RBP2.45□□□□□ -2.02
VPS50-219ENST00000495039 RAET1GQ6H3X3 334 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 SLC39A4Q6P5W5 647 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 WASH2PQ6VEQ5 465 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 FBXO16Q8IX29 292 aaPredicted RBP2.45□□□□□ -2.02
VPS50-219ENST00000495039 UBQLNLQ8IYU4 475 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 ZNF619Q8N2I2 560 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 CSNK1A1LQ8N752 337 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 MINDY2Q8NBR6 621 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 OR13F1Q8NGS4 319 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 PINX1Q96BK5 328 aaKnown RBP2.45□□□□□ -2.02
VPS50-219ENST00000495039 VPS39Q96JC1 886 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 KIR2DL4Q99706 377 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 DPH7Q9BTV6 452 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 TM2D1Q9BX74 207 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 NFKBIZQ9BYH8 718 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 GLT8D2Q9H1C3 349 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 HSD3B7Q9H2F3 369 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 YAE1D1Q9NRH1 226 aa2.45□□□□□ -2.02
VPS50-219ENST00000495039 RBM28Q9NW13 759 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms