RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SPTY2D1-AS1A0A0U1RR47 76 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 SMIM30A4D0T7 59 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 FAM221BA6H8Z2 402 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 OR5K4A6NMS3 321 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 H0YGG7 62 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 H3BN98 237 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 KIR2DS3K7RE56 304 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 CASC3O15234 703 aaKnown RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 EIF2S1P05198 315 aaKnown RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 THEGLP0DJG4 465 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 ICAM2P13598 275 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 BMP8BP34820 402 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 ARF3P61204 181 aaPredicted RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 SIM1P81133 766 aaPredicted RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 IFITM2Q01629 132 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 FZD2Q14332 565 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 KIR2DS5Q14953 304 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 PGBD2Q6P3X8 592 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 OR4K14Q8NGD5 310 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 BAHD1Q8TBE0 780 aaPredicted RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 RERGQ96A58 199 aaPredicted RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 MAP6Q96JE9 813 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 FNDC11Q9BVV2 318 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 SLC38A1Q9H2H9 487 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 GHITMQ9H3K2 345 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 PCDHGB6Q9Y5F9 930 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 KLK4Q9Y5K2 254 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 A0A1W2PRQ8 180 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 ENTPD6O75354 484 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 MED26O95402 600 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 PRKCAP17252 672 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 ZNF10P21506 573 aaPredicted RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 TLX1P31314 330 aaPredicted RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 UGT2B10P36537 528 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 OLR1P78380 273 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 SPANXN2Q5MJ10 180 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 FAM111BQ6SJ93 734 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 OR4N5Q8IXE1 308 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 OR8H2Q8N162 312 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 OR7G2Q8NG99 324 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 CEP19Q96LK0 163 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 SP140LQ9H930 580 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 CTPS2Q9NRF8 586 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 TMEM74BQ9NUR3 256 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 WDR70Q9NW82 654 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 WSB2Q9NYS7 404 aaPredicted RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 LIPT1Q9Y234 373 aa12.88□□□□□ -0.35
VCP-207ENST00000493886 MRPS2Q9Y399 296 aaKnown RBP12.88□□□□□ -0.35
VCP-207ENST00000493886 ZNF860A6NHJ4 632 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 PRSS47A8MTI9 375 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 OR5F1O95221 314 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 APOL3O95236 402 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 CHRNEQ04844 493 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 MXD1Q05195 221 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 ILKQ13418 452 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 PODNL1Q6PEZ8 512 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 PAQR6Q6TCH4 344 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
VCP-207ENST00000493886 SLC34A3Q8N130 599 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 TRNT1Q96Q11 434 aaKnown RBP12.87□□□□□ -0.35
VCP-207ENST00000493886 CALML5Q9NZT1 146 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 SLC22A7Q9Y694 548 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 A0A0J9YY10 115 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 MPZL2O60487 215 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 GPX5O75715 221 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 CTSEP14091 401 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 TARDBPQ13148 414 aaKnown RBP eCLIP12.87□□□□□ -0.35
VCP-207ENST00000493886 C1orf61Q13536 156 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 SSX1Q16384 188 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 ZNF181Q2M3W8 571 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 LRIT3Q3SXY7 679 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 ZNF311Q5JNZ3 666 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 C16orf62Q7Z3J2 963 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 ZNF761Q86XN6 746 aaPredicted RBP12.87□□□□□ -0.35
VCP-207ENST00000493886 IQCF1Q8N6M8 205 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 ADAMTS15Q8TE58 950 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
VCP-207ENST00000493886 CPNE5Q9HCH3 593 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 GPR27Q9NS67 375 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 C2orf42Q9NWW7 574 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 NTMQ9P121 344 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 EYSQ5T1H1 3165 aa12.87□□□□□ -0.35
VCP-207ENST00000493886 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
VCP-207ENST00000493886 LOC110117498-PIK3R3F6TDL0 507 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 LINC01387J3KSC0 135 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 ALPPP05187 535 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 TSPAN7P41732 249 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 ZMAT1Q5H9K5 638 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 RNF44Q7L0R7 432 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 KRT77Q7Z794 578 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 TMEFF1Q8IYR6 380 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 ARL6IP6Q8N6S5 226 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 FAM46DQ8NEK8 389 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 RSC1A1Q92681 617 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 ZG16BQ96DA0 208 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 SLC35A4Q96G79 324 aa12.86□□□□□ -0.35
VCP-207ENST00000493886 MS4A4EQ96PG1 132 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms