RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 GLIPR2Q9H4G4 154 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 POLR1BQ9H9Y6 1135 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 NECTIN3Q9NQS3 549 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 PRTFDC1Q9NRG1 225 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 ATAD3AQ9NVI7 634 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 FAM120CQ9NX05 1096 aaKnown RBP6.11□□□□□ -1.43
TRA2B-216ENST00000493864 TAS2R1Q9NYW7 299 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 EHD3Q9NZN3 535 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 FOXJ2Q9P0K8 574 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
TRA2B-216ENST00000493864 CTSFQ9UBX1 484 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 BTNL2Q9UIR0 455 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 ZNF780BQ9Y6R6 833 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 SPACA6W5XKT8 324 aa6.11□□□□□ -1.43
TRA2B-216ENST00000493864 URB1O60287 2271 aaKnown RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 SDK2Q58EX2 2172 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 IGLV3-12A0A075B6K2 115 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 A0A096LPI6 279 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 VSTM2BA6NLU5 285 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 BBIP1A8MTZ0 92 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 A8MUA0 341 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ANKRD65E5RJM6 399 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 RNASET2O00584 256 aaKnown RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 CLDN4O14493 209 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ATP5HO75947 161 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 UNC5CO95185 931 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 KLK3P07288 261 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ABCB1P08183 1280 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 KRT16P08779 473 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 CPMP14384 443 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PORP16435 677 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ZNF20P17024 532 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 HOXB9P17482 250 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PTPN4P29074 926 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PTPN6P29350 595 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PPP2R1BP30154 601 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 SLC5A2P31639 672 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MPIP34949 423 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 FRKP42685 505 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 NUDT2P50583 147 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 CDK9P50750 372 aaKnown RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 NCBP2P52298 156 aaKnown RBP eCLIP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MAP2K6P52564 334 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 HSD17B7P56937 341 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PSME3P61289 254 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 HBA1P69905 142 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 RHAGQ02094 409 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 SLC13A2Q13183 592 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ART3Q13508 389 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 CAPRIN1Q14444 709 aaKnown RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 LTB4RQ15722 352 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 GTDC1Q4AE62 458 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 COQ5Q5HYK3 327 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 C6orf10Q5SRN2 563 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MFSD4BQ5TF39 518 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 FAM69BQ5VUD6 431 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 DGAT2L6Q6ZPD8 337 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MSANTD1Q6ZTZ1 278 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 SEM1Q6ZVN7 128 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MED25Q71SY5 747 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ZNF771Q7L3S4 317 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MSRB3Q8IXL7 192 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 GALNT15Q8N3T1 639 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PCYOX1LQ8NBM8 494 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 VPS37AQ8NEZ2 397 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 OR10H5Q8NGA6 315 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 OR4A15Q8NGL6 344 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 SUN3Q8TAQ9 357 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 STT3BQ8TCJ2 826 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 KAT2AQ92830 837 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 TSLPQ969D9 159 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 LRRC58Q96CX6 371 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 AURKBQ96GD4 344 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 LRFN5Q96NI6 719 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 SLC46A1Q96NT5 459 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 OR1F2PQ96R84 312 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PANX1Q96RD7 426 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 SLC39A3Q9BRY0 314 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 BTBD10Q9BSF8 475 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ALOXE3Q9BYJ1 711 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 CXorf36Q9H7Y0 433 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 RMND5AQ9H871 391 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MKKSQ9NPJ1 570 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ACSS1Q9NUB1 689 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 GID8Q9NWU2 228 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 SLC25A37Q9NYZ2 338 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ZNF282Q9UDV7 671 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 ANGPTL2Q9UKU9 493 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PADI1Q9ULC6 663 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 PCDHGB4Q9UN71 923 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 POLHQ9Y253 713 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MRPS33Q9Y291 106 aaKnown RBP6.1□□□□□ -1.43
TRA2B-216ENST00000493864 MAN2B2Q9Y2E5 1009 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 CLDN16Q9Y5I7 305 aa6.1□□□□□ -1.43
TRA2B-216ENST00000493864 TRBV5-3A0A0A0MS03 114 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 FXYD1O00168 92 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 RFXANKO14593 260 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 NVLO15381 856 aaKnown RBP6.09□□□□□ -1.43
TRA2B-216ENST00000493864 SLC16A6O15403 523 aa6.09□□□□□ -1.43
TRA2B-216ENST00000493864 GYG2O15488 501 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms