RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 FOLH1BQ9HBA9 442 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 PLCXD1Q9NUJ7 323 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 PAK1IP1Q9NWT1 392 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 GMEB2Q9UKD1 530 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 MMACHCQ9Y4U1 282 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 HEMK1Q9Y5R4 338 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 PI4KAP42356 2102 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 TPST2O60704 377 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 PRAMEF2O60811 474 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 MYF5P13349 255 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 NID1P14543 1247 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 FOLR1P15328 257 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 MAOAP21397 527 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 IFNGR2P38484 337 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 IDH2P48735 452 aaKnown RBP13.05□□□□□ -0.32
PTPN7-216ENST00000492977 PSG6Q00889 435 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 ALDH6A1Q02252 535 aaKnown RBP13.05□□□□□ -0.32
PTPN7-216ENST00000492977 FUT7Q11130 342 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF267Q14586 743 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-216ENST00000492977 HLA-BQ31612 363 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 LAIR1Q6GTX8 287 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 C1orf94Q6P1W5 598 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 TMEM71Q6P5X7 295 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 GATAD2AQ86YP4 633 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 METTL27Q8N6F8 245 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-216ENST00000492977 FAM181AQ8N9Y4 354 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 OR13F1Q8NGS4 319 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 OR1L3Q8NH93 324 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF420Q8TAQ5 688 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-216ENST00000492977 SGCDQ92629 289 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 PIGKQ92643 395 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 NMD3Q96D46 503 aaKnown RBP13.05□□□□□ -0.32
PTPN7-216ENST00000492977 ZC3H10Q96K80 434 aaKnown RBP13.05□□□□□ -0.32
PTPN7-216ENST00000492977 MCHR1Q99705 422 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 NDC1Q9BTX1 674 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 IMPAD1Q9NX62 359 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 PTTG2Q9NZH5 202 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 AASSQ9UDR5 926 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 UNC13CQ8NB66 2214 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 DNAH14Q0VDD8 3507 aa13.05□□□□□ -0.32
PTPN7-216ENST00000492977 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 FRS3O43559 492 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 FAM20BO75063 409 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 KCNK2O95069 426 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 OR5F1O95221 314 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 GABRB1P18505 474 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 ITIH1P19827 911 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 GSTM3P21266 225 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 ALAS2P22557 587 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 SSTR4P31391 388 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 HOXD12P35452 270 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 KRT20P35900 424 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 ENTPD8Q5MY95 495 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 ZER1Q7Z7L7 766 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 RANBP3LQ86VV4 465 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF540Q8NDQ6 660 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 VSTM2LQ96N03 204 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 NUDT22Q9BRQ3 303 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 NECTIN3Q9NQS3 549 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 LANCL2Q9NS86 450 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF226Q9NYT6 803 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 NDOR1Q9UHB4 597 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 MAU2Q9Y6X3 613 aa13.04□□□□□ -0.32
PTPN7-216ENST00000492977 CPSF4LA6NMK7 179 aaKnown RBP13.03□□□□□ -0.32
PTPN7-216ENST00000492977 A8MU76 341 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 DSCR3O14972 297 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 RGS10O43665 173 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 SEC14L2O76054 403 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 IFNA16P05015 189 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 PCMT1P22061 227 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 MMP11P24347 488 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 DCKP27707 260 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 TRHRP34981 398 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-216ENST00000492977 GSSP48637 474 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 MAPK14Q16539 360 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 SMN1Q16637 294 aaKnown RBP13.03□□□□□ -0.32
PTPN7-216ENST00000492977 DECR1Q16698 335 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 GTF2IRD2BQ6EKJ0 949 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 FIGNL1Q6PIW4 674 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 PLEKHM3Q6ZWE6 761 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 PRSS48Q7RTY5 328 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 RABEPKQ7Z6M1 372 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 GTF2IRD2Q86UP8 949 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 CLVS1Q8IUQ0 354 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-216ENST00000492977 OR7G1Q8NGA0 311 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 GNPDA2Q8TDQ7 276 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF501Q96CX3 271 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-216ENST00000492977 PTCHD1Q96NR3 888 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 CCDC90BQ9GZT6 254 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 OR10A5Q9H207 317 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 CTPS2Q9NRF8 586 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 SEMA4GQ9NTN9 838 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 FBXO34Q9NWN3 711 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 ERVK-18Q9QC07 812 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 KCNE5Q9UJ90 142 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 ASXL3Q9C0F0 2248 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 RP1P56715 2156 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 A0A087WUU8 490 aa13.03□□□□□ -0.32
PTPN7-216ENST00000492977 LY6G6EA0A0G2JKS1 128 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms