RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 IGLV3-10A0A075B6K4 115 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 A0A087WZY1 265 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 RNF222A6NCQ9 220 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 LRRC30A6NM36 301 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 F8WDY8 70 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 STX11O75558 287 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 OR4F21O95013 312 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 SLC2A10O95528 541 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 MBD3O95983 291 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 JCHAINP01591 159 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 H2AFZP0C0S5 128 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 H2AFXP16104 143 aaPredicted RBP3.02□□□□□ -1.93
CLK1-213ENST00000492793 DESP17661 470 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 KLK2P20151 261 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 KIF5BP33176 963 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 MAGEA5P43359 124 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 ALDH3B2P48448 385 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 NOVA1P51513 510 aaKnown RBP3.02□□□□□ -1.93
CLK1-213ENST00000492793 GPC3P51654 580 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 PDZK1IP1Q13113 114 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 ASAH1Q13510 395 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 MAPK6Q16659 721 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 QRICH1Q2TAL8 776 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 USH1GQ495M9 461 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 CYBRD1Q53TN4 286 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 ZNF311Q5JNZ3 666 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 OR8G2PQ6IF36 304 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 CENPUQ71F23 418 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 GET4Q7L5D6 327 aaPredicted RBP3.02□□□□□ -1.93
CLK1-213ENST00000492793 CCDC26Q8TAB7 109 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 ZPLD1Q8TCW7 415 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 ADIPOR1Q96A54 375 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 CASD1Q96PB1 797 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 THUMPD2Q9BTF0 503 aaKnown RBP3.02□□□□□ -1.93
CLK1-213ENST00000492793 ZNF416Q9BWM5 594 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 TSSK1BQ9BXA7 367 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 GLT8D2Q9H1C3 349 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 MEPEQ9NQ76 525 aaPredicted RBP3.02□□□□□ -1.93
CLK1-213ENST00000492793 DPM3Q9P2X0 92 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 MMP24Q9Y5R2 645 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 CUX2O14529 1486 aa3.02□□□□□ -1.93
CLK1-213ENST00000492793 RAI1Q7Z5J4 1906 aaPredicted RBP3.01□□□□□ -1.93
CLK1-213ENST00000492793 CCDC7Q96M83 1385 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CLDN3O15551 220 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 LANCL1O43813 399 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 JAK2O60674 1132 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CSF2P04141 144 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CT45A10P0DMU9 189 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 PRKAR2BP31323 418 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 IL2RGP31785 369 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 NF2P35240 595 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 ADRA1AP35348 466 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 XCR1P46094 333 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 OR1D4P47884 311 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 NTHL1P78549 312 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CXCL6P80162 114 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CHI3L2Q15782 390 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CDKN3Q16667 212 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CYP51A1Q16850 503 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CCDC57Q2TAC2 916 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 TEX44Q53QW1 395 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 LRRC8BQ6P9F7 803 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 HSD11B1LQ7Z5J1 315 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CBWD2Q8IUF1 395 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CENPLQ8N0S6 344 aaPredicted RBP3.01□□□□□ -1.93
CLK1-213ENST00000492793 CADM2Q8N3J6 435 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 ZSCAN4Q8NAM6 433 aaPredicted RBP3.01□□□□□ -1.93
CLK1-213ENST00000492793 CNIH3Q8TBE1 160 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 GTSF1Q8WW33 167 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 C18orf25Q96B23 403 aaPredicted RBP3.01□□□□□ -1.93
CLK1-213ENST00000492793 SIGLEC12Q96PQ1 595 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 CCSER1Q9C0I3 900 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 COMMD4Q9H0A8 199 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 SLC25A51Q9H1U9 297 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 DHX33Q9H6R0 707 aaKnown RBP3.01□□□□□ -1.93
CLK1-213ENST00000492793 COQ10BQ9H8M1 238 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 GPN2Q9H9Y4 310 aaPredicted RBP3.01□□□□□ -1.93
CLK1-213ENST00000492793 CRLS1Q9UJA2 301 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 DUSP12Q9UNI6 340 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 EIF3LQ9Y262 564 aaKnown RBP3.01□□□□□ -1.93
CLK1-213ENST00000492793 AP1M2Q9Y6Q5 423 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 U3KQV3 271 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 LRRK1Q38SD2 2015 aa3.01□□□□□ -1.93
CLK1-213ENST00000492793 PARD3Q8TEW0 1356 aa3□□□□□ -1.93
CLK1-213ENST00000492793 ZSCAN5BA6NJL1 495 aa3□□□□□ -1.93
CLK1-213ENST00000492793 SDHDO14521 159 aa3□□□□□ -1.93
CLK1-213ENST00000492793 TM9SF1O15321 606 aa3□□□□□ -1.93
CLK1-213ENST00000492793 CHADO15335 359 aa3□□□□□ -1.93
CLK1-213ENST00000492793 SMPD2O60906 423 aa3□□□□□ -1.93
CLK1-213ENST00000492793 DUSP14O95147 198 aaKnown RBP3□□□□□ -1.93
CLK1-213ENST00000492793 PGK1P00558 417 aa3□□□□□ -1.93
CLK1-213ENST00000492793 CCDC166P0CW27 439 aa3□□□□□ -1.93
CLK1-213ENST00000492793 CDH5P33151 784 aaPredicted RBP3□□□□□ -1.93
CLK1-213ENST00000492793 RPL4P36578 427 aaKnown RBP3□□□□□ -1.93
CLK1-213ENST00000492793 MDH2P40926 338 aaKnown RBP3□□□□□ -1.93
CLK1-213ENST00000492793 DHPSP49366 369 aaPredicted RBP3□□□□□ -1.93
CLK1-213ENST00000492793 RPS8P62241 208 aaKnown RBP3□□□□□ -1.93
CLK1-213ENST00000492793 BDH1Q02338 343 aa3□□□□□ -1.93
CLK1-213ENST00000492793 RGS1Q08116 209 aa3□□□□□ -1.93
CLK1-213ENST00000492793 TPD52L1Q16890 204 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms