RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CCDC188H7C350 402 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 PLOD3O60568 738 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 GUCY1B2O75343 617 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 GCM2O75603 506 aaPredicted RBP11.81□□□□□ -0.52
USF1-206ENST00000491629 C8BP07358 591 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 IL3P08700 152 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 CHN1P15882 459 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 TSPAN8P19075 237 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 ARL1P40616 181 aaPredicted RBP11.81□□□□□ -0.52
USF1-206ENST00000491629 IFT88Q13099 833 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 GANABQ14697 944 aaKnown RBP11.81□□□□□ -0.52
USF1-206ENST00000491629 TSC22D1Q15714 1073 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 PGGHGQ32M88 737 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 KRTAP24-1Q3LI83 254 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 TTC19Q6DKK2 380 aaPredicted RBP11.81□□□□□ -0.52
USF1-206ENST00000491629 MFSD12Q6NUT3 480 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 MILR1Q7Z6M3 343 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 MARCH3Q86UD3 253 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 EXOSC8Q96B26 276 aaKnown RBP11.81□□□□□ -0.52
USF1-206ENST00000491629 ERP27Q96DN0 273 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 ZBED6CLQ96FA7 236 aaPredicted RBP11.81□□□□□ -0.52
USF1-206ENST00000491629 ERP44Q9BS26 406 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 TSPYL1Q9H0U9 437 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 RNF14Q9UBS8 474 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 PSME2Q9UL46 239 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 LIPT1Q9Y234 373 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 AP4B1Q9Y6B7 739 aa11.81□□□□□ -0.52
USF1-206ENST00000491629 ARFGEF3Q5TH69 2177 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 LINC01387J3KSC0 135 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 BCAS2O75934 225 aaPredicted RBP11.8□□□□□ -0.52
USF1-206ENST00000491629 NTN1O95631 604 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 IFNA2P01563 188 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 OPN1LWP04000 364 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 RPS17P08708 135 aaKnown RBP11.8□□□□□ -0.52
USF1-206ENST00000491629 SBK3P0C264 359 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 PSMB1P20618 241 aaKnown RBP11.8□□□□□ -0.52
USF1-206ENST00000491629 IDUAP35475 653 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 MAGEA4P43358 317 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 TRA2BP62995 288 aaKnown RBP11.8□□□□□ -0.52
USF1-206ENST00000491629 ETFDHQ16134 617 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 NCMAPQ5T1S8 102 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 OR10D3Q8NH80 312 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 S100PBPQ96BU1 408 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 MTBPQ96DY7 904 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 MRRFQ96E11 262 aaKnown RBP11.8□□□□□ -0.52
USF1-206ENST00000491629 DTNBP1Q96EV8 351 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 GMPPAQ96IJ6 420 aaPredicted RBP11.8□□□□□ -0.52
USF1-206ENST00000491629 ELOVL6Q9H5J4 265 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 BRF2Q9HAW0 419 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 EMC9Q9Y3B6 208 aa11.8□□□□□ -0.52
USF1-206ENST00000491629 NUP214P35658 2090 aaPredicted RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 IGLV3-32A0A0A0MS00 114 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 A8MV72 311 aaPredicted RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 STX16-NPEPL1H3BU86 382 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 EIF1AYO14602 144 aaKnown RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 STX16O14662 325 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 RAD51CO43502 376 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 GMFGO60234 142 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 PSMG1O95456 288 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 TP53P04637 393 aaPredicted RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 FCGR2AP12318 317 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 PSMA4P25789 261 aaKnown RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 KRT20P35900 424 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 EIF1AXP47813 144 aaKnown RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 CDH13P55290 713 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 RPS3AP61247 264 aaKnown RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 NAB1Q13506 487 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 SGCBQ16585 318 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 CHRFAM7AQ494W8 412 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 GLYR1Q49A26 553 aaPredicted RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 LGSNQ5TDP6 509 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 ALKBH2Q6NS38 261 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 ZDHHC24Q6UX98 284 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 CCDC91Q7Z6B0 441 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 GALNT10Q86SR1 603 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 KBTBD8Q8NFY9 601 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 FBXO25Q8TCJ0 367 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 ZNF483Q8TF39 744 aaPredicted RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 SMAP2Q8WU79 429 aaPredicted RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 SELENOMQ8WWX9 145 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 FBXW5Q969U6 566 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 FAIM2Q9BWQ8 316 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 STMN4Q9H169 189 aaPredicted RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 OR10A4Q9H209 315 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 KCNF1Q9H3M0 494 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 PFDN4Q9NQP4 134 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 FAM120CQ9NX05 1096 aaKnown RBP11.79□□□□□ -0.52
USF1-206ENST00000491629 MCM8Q9UJA3 840 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 ABCG2Q9UNQ0 655 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 GPR52Q9Y2T5 361 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 OR10H1Q9Y4A9 318 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 RNF115Q9Y4L5 304 aa11.79□□□□□ -0.52
USF1-206ENST00000491629 IGHV4-30-2A0A087WSY4 118 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 A0A0J9YW62 118 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 CXCL13O43927 109 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 OR4F21O95013 312 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 IGKV1D-16P01601 117 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 AGTR1P30556 359 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 STX2P32856 288 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms