RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	CHAF1B	Q13112	559 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	GK3P	Q14409	553 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	SYPL1	Q16563	259 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	ZSWIM7	Q19AV6	140 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	GRAMD1B	Q3KR37	738 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	ARHGAP11B	Q3KRB8	267 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	DCAF10	Q5QP82	559 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	HLA-DQA1	Q5Y7H0	255 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	HEPHL1	Q6MZM0	1159 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	ENPP6	Q6UWR7	440 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	RNF111	Q6ZNA4	994 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	CYP4Z1	Q86W10	505 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	ZDHHC21	Q8IVQ6	265 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	PEX5L	Q8IYB4	626 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	PACRGL	Q8N7B6	248 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	ANKFN1	Q8N957	763 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	CHDH	Q8NE62	594 aa	Predicted RBP	12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	LRTOMT	Q8WZ04	291 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	SLC35A4	Q96G79	324 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	LMF2	Q9BU23	707 aa	Known RBP	12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	G6PC3	Q9BUM1	346 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	OSBPL10	Q9BXB5	764 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	SERHL2	Q9H4I8	314 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	SOX17	Q9H6I2	414 aa	Predicted RBP	12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	IL1RAP	Q9NPH3	570 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	KLHL28	Q9NXS3	571 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	CTSF	Q9UBX1	484 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	RIMS3	Q9UJD0	308 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	CNOT11	Q9UKZ1	510 aa	Known RBP	12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	ERVK-19	Q9WJR5	959 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	FAM32A	Q9Y421	112 aa	Known RBP	12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	SCN3A	Q9NY46	2000 aa		12.5	□□□□□ -0.41
NUP188-208	ENST00000491502	BOD1L1	Q8NFC6	3051 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	MYOCOS	A0A1B0GUC4	107 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502		A8MVJ9	347 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	TPST1	O60507	370 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	DPM1	O60762	260 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	ALOX12B	O75342	701 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	JRK	O75564	520 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	NKX2-2	O95096	273 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	CBX7	O95931	251 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	CST1	P01037	141 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	C1QC	P02747	245 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	CT62	P0C5K7	136 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	ATP6V1C1	P21283	382 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	IFNA8	P32881	189 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	PTGER1	P34995	402 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	CASR	P41180	1078 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	MAGEA2	P43356	314 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	HSPA13	P48723	471 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	PSMD4	P55036	377 aa	Known RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	AIMP2	Q13155	320 aa	Known RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	EXOSC7	Q15024	291 aa	Known RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	LARS2	Q15031	903 aa	Known RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	PIWIL3	Q7Z3Z3	882 aa	Known RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	PACS2	Q86VP3	889 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	GALNT16	Q8N428	558 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	SVOPL	Q8N434	492 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	SLC16A11	Q8NCK7	471 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	OIT3	Q8WWZ8	545 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	NR4A3	Q92570	626 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	HOXB13	Q92826	284 aa	Predicted RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	CDS1	Q92903	461 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	SENP5	Q96HI0	755 aa	Predicted RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	COL21A1	Q96P44	957 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	CRB3	Q9BUF7	120 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	PINK1	Q9BXM7	581 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	RUBCNL	Q9H714	662 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	FOLH1B	Q9HBA9	442 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	GPR83	Q9NYM4	423 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	C3orf18	Q9UK00	162 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	SLC9A8	Q9Y2E8	581 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	DTNA	Q9Y4J8	743 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	CLDN16	Q9Y5I7	305 aa		12.49	□□□□□ -0.41
NUP188-208	ENST00000491502	GPC6	Q9Y625	555 aa	Predicted RBP	12.49	□□□□□ -0.41
NUP188-208	ENST00000491502		A6NL46	340 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	IDS	B3KWA1	339 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502		H0YJX3	145 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	TGFBR3L	H3BV60	316 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502		K7EM74	188 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	SOCS6	O14544	535 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	MFN2	O95140	757 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	H6PD	O95479	791 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	IFNW1	P05000	195 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	ACP2	P11117	423 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	S1PR1	P21453	382 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	GABRA3	P34903	492 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	TRHR	P34981	398 aa	Predicted RBP	12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	DUSP5	Q16690	384 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	EIPR1	Q53HC9	387 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	EXOSC6	Q5RKV6	272 aa	Known RBP	12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	DCST2	Q5T1A1	773 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	ZBTB49	Q6ZSB9	765 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	SHISA6	Q6ZSJ9	500 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	SLC29A4	Q7RTT9	530 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	PRSS58	Q8IYP2	241 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	LILRA2	Q8N149	483 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	ICA1L	Q8NDH6	482 aa		12.48	□□□□□ -0.41
NUP188-208	ENST00000491502	FDCSP	Q8NFU4	85 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms