RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ETS2P15036 469 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 CASRP41180 1078 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 SOX3P41225 446 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 RFX3P48380 749 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 MFAP5Q13361 173 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 NTRK2Q16620 822 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 ZNF791Q3KP31 576 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-230ENST00000491028 FLYWCH1Q4VC44 716 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 RPS26P11Q5JNZ5 115 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-230ENST00000491028 BORAQ6PGQ7 559 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 ZNF771Q7L3S4 317 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-230ENST00000491028 NUP54Q7Z3B4 507 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 BEST3Q8N1M1 668 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 TTC9Q92623 222 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 CCDC124Q96CT7 223 aaKnown RBP17.15■□□□□ 0.34
MCF2L-230ENST00000491028 RAB3IPQ96QF0 476 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-230ENST00000491028 ZNF607Q96SK3 696 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 ADOQ96SZ5 270 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 HOXD1Q9GZZ0 328 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 ZNF552Q9H707 407 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-230ENST00000491028 FBXO34Q9NWN3 711 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 STMN3Q9NZ72 180 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 EGFL7Q9UHF1 273 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 SLC7A8Q9UHI5 535 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 ASPMQ8IZT6 3477 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 MED13Q9UHV7 2174 aa17.15■□□□□ 0.34
MCF2L-230ENST00000491028 CFAP73A6NFT4 308 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 A6NL46 340 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 FCMRO60667 390 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 ZIC2O95409 532 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 STAMBPO95630 424 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 CXADRP78310 365 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 RPP38P78345 283 aaKnown RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 CHRNEQ04844 493 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 TRAP1Q12931 704 aaKnown RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 GLYATQ6IB77 296 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 ZAR1Q86SH2 424 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 GALNT10Q86SR1 603 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 FDCSPQ8NFU4 85 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 FIG4Q92562 907 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 HGDQ93099 445 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 UTP4Q969X6 686 aaKnown RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 SECISBP2Q96T21 854 aaKnown RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 SPATA5L1Q9BVQ7 753 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 RNF32Q9H0A6 362 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 TRIM45Q9H8W5 580 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 MTHFD2LQ9H903 347 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 CACYBPQ9HB71 228 aaKnown RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 HPF1Q9NWY4 346 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 ACTR3BQ9P1U1 418 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 MKLN1Q9UL63 735 aa17.14■□□□□ 0.33
MCF2L-230ENST00000491028 GPC6Q9Y625 555 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-230ENST00000491028 TP53I11O14683 189 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 ARPC2O15144 300 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 UGT2B11O75310 529 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 SERPINB7O75635 380 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 SORBS2O94875 1100 aaKnown RBP17.13■□□□□ 0.33
MCF2L-230ENST00000491028 OR6B1O95007 311 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 UTS2O95399 124 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 ITGB2P05107 769 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 ALPPP05187 535 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 NGFRP08138 427 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 CYP4B1P13584 511 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 RPS4Y1P22090 263 aaKnown RBP17.13■□□□□ 0.33
MCF2L-230ENST00000491028 KDELR2P33947 212 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 MSX2P35548 267 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-230ENST00000491028 DCTP40126 519 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 HLCSP50747 726 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 ATP12AP54707 1039 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 POLE2P56282 527 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 KCNJ2P63252 427 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 GPR68Q15743 365 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 OLIG3Q7RTU3 272 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 PEX5LQ8IYB4 626 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 ZNF527Q8NB42 609 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 OR52E4Q8NGH9 312 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 SPPL2AQ8TCT8 520 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 TMCO6Q96DC7 493 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 PCDHAC1Q9H158 963 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 GORASP2Q9H8Y8 452 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 ZBTB20Q9HC78 741 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-230ENST00000491028 UBQLN4Q9NRR5 601 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 ABCG2Q9UNQ0 655 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 POMPQ9Y244 141 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 IFT52Q9Y366 437 aa17.13■□□□□ 0.33
MCF2L-230ENST00000491028 PCDHGA9Q9Y5G4 932 aaKnown RBP17.13■□□□□ 0.33
MCF2L-230ENST00000491028 IGF2RP11717 2491 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 AGAP5A6NIR3 686 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 NPIPB9F8W1W9 429 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 GCM2O75603 506 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-230ENST00000491028 CIB2O75838 187 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 IFNA14P01570 189 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 DBIP07108 87 aaKnown RBP17.12■□□□□ 0.33
MCF2L-230ENST00000491028 THBS1P07996 1170 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 NQO1P15559 274 aaKnown RBP17.12■□□□□ 0.33
MCF2L-230ENST00000491028 NCK1P16333 377 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 AQP1P29972 269 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 CYB561P49447 251 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 FBXW4P57775 412 aa17.12■□□□□ 0.33
MCF2L-230ENST00000491028 RAPSNQ13702 412 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms