RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 PRR22Q8IZ63 422 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 CYP4Z2PQ8N1L4 340 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 ARMC10Q8N2F6 343 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 ZNF614Q8N883 585 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 SLC38A5Q8WUX1 472 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 TTC9Q92623 222 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 MAL2Q969L2 176 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 EFHD2Q96C19 240 aaPredicted RBP10.1□□□□□ -0.79
VARS2-210ENST00000490699 SGCZQ96LD1 299 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 C5orf34Q96MH7 638 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 LMF1Q96S06 567 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 ADOQ96SZ5 270 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 SDF2Q99470 211 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 TREX2Q9BQ50 279 aaPredicted RBP10.1□□□□□ -0.79
VARS2-210ENST00000490699 TBL1XR1Q9BZK7 514 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 SERHL2Q9H4I8 314 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 METTL7AQ9H8H3 244 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 MTHFD2LQ9H903 347 aaPredicted RBP10.1□□□□□ -0.79
VARS2-210ENST00000490699 LIN28AQ9H9Z2 209 aaKnown RBP10.1□□□□□ -0.79
VARS2-210ENST00000490699 ZBTB20Q9HC78 741 aaPredicted RBP10.1□□□□□ -0.79
VARS2-210ENST00000490699 TIMMDC1Q9NPL8 285 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 SDHAF3Q9NRP4 125 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 UBQLN4Q9NRR5 601 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 ADPRHL2Q9NX46 363 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 KLHL28Q9NXS3 571 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 SEC14L3Q9UDX4 400 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 RPS6KA6Q9UK32 745 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 IFT52Q9Y366 437 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 PCDHGB7Q9Y5F8 929 aa10.1□□□□□ -0.79
VARS2-210ENST00000490699 DCHS1Q96JQ0 3298 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 CACNA1AO00555 2505 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 CXCR6O00574 342 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 PDE5AO76074 875 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 PGM3O95394 542 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 P04436 131 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 CAPNS1P04632 268 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 DBIP07108 87 aaKnown RBP10.09□□□□□ -0.79
VARS2-210ENST00000490699 FBXO45P0C2W1 286 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 CD46P15529 392 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 IL7RP16871 459 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 AQP1P29972 269 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 SOX11P35716 441 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 SOX3P41225 446 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 HLCSP50747 726 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 POLE2P56282 527 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 LIN52Q52LA3 116 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 LRRC23Q53EV4 343 aaPredicted RBP10.09□□□□□ -0.79
VARS2-210ENST00000490699 MTX3Q5HYI7 312 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 TBCELQ5QJ74 424 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 EXOSC6Q5RKV6 272 aaKnown RBP10.09□□□□□ -0.79
VARS2-210ENST00000490699 CCNJQ5T5M9 372 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 B3GNTL1Q67FW5 361 aaPredicted RBP10.09□□□□□ -0.79
VARS2-210ENST00000490699 IL20RBQ6UXL0 311 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 DHFR2Q86XF0 187 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 ARMC8Q8IUR7 673 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 BEST3Q8N1M1 668 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 ZADH2Q8N4Q0 377 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 ANKFN1Q8N957 763 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 GOLM1Q8NBJ4 401 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 OR4N2Q8NGD1 307 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 OR5M3Q8NGP4 307 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 ASB9Q96DX5 294 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 NSMCE2Q96MF7 247 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 ZNF583Q96ND8 569 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 SECISBP2Q96T21 854 aaKnown RBP10.09□□□□□ -0.79
VARS2-210ENST00000490699 CADM1Q9BY67 442 aaKnown RBP10.09□□□□□ -0.79
VARS2-210ENST00000490699 ZNF350Q9GZX5 532 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 RNF32Q9H0A6 362 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.09□□□□□ -0.79
VARS2-210ENST00000490699 BCL2L10Q9HD36 194 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 KLRF1Q9NZS2 232 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 CNIH4Q9P003 139 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 ABCG2Q9UNQ0 655 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 SAMD4AQ9UPU9 718 aaKnown RBP10.09□□□□□ -0.79
VARS2-210ENST00000490699 PCDHGA9Q9Y5G4 932 aaKnown RBP10.09□□□□□ -0.79
VARS2-210ENST00000490699 PCDHGA10Q9Y5H3 936 aa10.09□□□□□ -0.79
VARS2-210ENST00000490699 OR5H15A6NDH6 313 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 MASP2O00187 686 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 KIAA0513O60268 411 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 UTS2O95399 124 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 UQCRBP14927 111 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 GGT1P19440 569 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 DCTP40126 519 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 ATP12AP54707 1039 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 TRAP1Q12931 704 aaKnown RBP10.08□□□□□ -0.8
VARS2-210ENST00000490699 CEACAM7Q14002 265 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 ELOAQ14241 798 aaKnown RBP10.08□□□□□ -0.8
VARS2-210ENST00000490699 FLOT2Q14254 428 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 TRIM25Q14258 630 aaKnown RBP10.08□□□□□ -0.8
VARS2-210ENST00000490699 NTRK2Q16620 822 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 C1orf146Q5VVC0 180 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 SLC22A10Q63ZE4 541 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 GLYATQ6IB77 296 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 C16orf47Q6ZP98 133 aaPredicted RBP10.08□□□□□ -0.8
VARS2-210ENST00000490699 ASRGL1Q7L266 308 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 GALNT10Q86SR1 603 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 PTOV1Q86YD1 416 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 MISPQ8IVT2 679 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 EID3Q8N140 333 aa10.08□□□□□ -0.8
VARS2-210ENST00000490699 FAM98AQ8NCA5 519 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms