RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 MC3RP41968 323 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 CCT5P48643 541 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 NCBP2P52298 156 aaKnown RBP eCLIP6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 TPD52P55327 224 aaPredicted RBP6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 CLDN15P56746 228 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 HEPACAMQ14CZ8 416 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 IMPG1Q17R60 797 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 UGT3A2Q3SY77 523 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 CCDC153Q494R4 210 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 SPIN4Q56A73 249 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 CFAP157Q5JU67 520 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 RIPPLY2Q5TAB7 128 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 C6orf163Q5TEZ5 329 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 LIPMQ5VYY2 423 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 SLC30A6Q6NXT4 461 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 TMEM107Q6UX40 140 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 APOOLQ6UXV4 268 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 ZCCHC23Q6ZST2 131 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 GALNT10Q86SR1 603 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 TRABD2AQ86V40 505 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 EXOC3L1Q86VI1 746 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 LCA5Q86VQ0 697 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 EID3Q8N140 333 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 BANPQ8N9N5 519 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 C9orf106Q8NAJ2 232 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 C17orf47Q8NEP4 570 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 OR5M1Q8NGP8 315 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 ELP4Q96EB1 424 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 C14orf79Q96F83 325 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 SLC35A4Q96G79 324 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 COL21A1Q96P44 957 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 FAM111AQ96PZ2 611 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 BBS4Q96RK4 519 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 TRIB1Q96RU8 372 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 SECISBP2Q96T21 854 aaKnown RBP6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 TUBA1CQ9BQE3 449 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 G6PC3Q9BUM1 346 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 OSBPL11Q9BXB4 747 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 DSN1Q9H410 356 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 MCCC2Q9HCC0 563 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 FBXO34Q9NWN3 711 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 MED11Q9P086 117 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 PRODH2Q9UF12 536 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 CFL2Q9Y281 166 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 RPH3AQ9Y2J0 694 aaPredicted RBP6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 L3MBTL1Q9Y468 752 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 DOCK7Q96N67 2140 aa6.64□□□□□ -1.35
PRPF4B-208ENST00000490653 LOC100289279A0A1B0GTE1 492 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 OR6C70A6NIJ9 312 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 NPIPB8E9PQR5 432 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 SLC28A1O00337 649 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 AZIN1O14977 448 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 ACOX3O15254 700 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 SCO2O43819 266 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 GMFGO60234 142 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 FADS1O60427 444 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 TRIM13O60858 407 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 CRCPO75575 148 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 CBR3O75828 277 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 RPLP1P05386 114 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 UROSP10746 265 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 GABRA1P14867 456 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 JUNBP17275 347 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 BMP5P22003 454 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 SSTR2P30874 369 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 PRRC2AP48634 2157 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 B3GALT5-AS1P59052 145 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 DCAF7P61962 342 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 ZNF763Q0D2J5 394 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 ARL13AQ5H913 290 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 NHSL2Q5HYW2 709 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 TMEM81Q6P7N7 255 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 ARSKQ6UWY0 536 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 LARP4Q71RC2 724 aaKnown RBP eCLIP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 ZAR1Q86SH2 424 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 MARCH3Q86UD3 253 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 CDH24Q86UP0 819 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 LSRQ86X29 649 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 PLCZ1Q86YW0 608 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 ZZZ3Q8IYH5 903 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 FAM9CQ8IZT9 166 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 EIF1ADQ8N9N8 165 aaKnown RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 LINC01560Q8TB33 94 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 AGR3Q8TD06 166 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 TCP10LQ8TDR4 215 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 RNF138Q8WVD3 245 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 PIK3R3Q92569 461 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 CCDC126Q96EE4 140 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 OTUB1Q96FW1 271 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 C16orf58Q96GQ5 468 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 FCRL1Q96LA6 429 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 C3orf30Q96M34 536 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 AMDHD1Q96NU7 426 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 TSSK3Q96PN8 268 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 BTBD9Q96Q07 612 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 NPAS1Q99742 590 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 YIPF4Q9BSR8 244 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 ABCA2Q9BZC7 2435 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 OR2B2Q9GZK3 357 aa6.63□□□□□ -1.35
PRPF4B-208ENST00000490653 PRDM14Q9GZV8 571 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms