RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MLC1Q15049 377 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 LSM12Q3MHD2 195 aaKnown RBP15.85■□□□□ 0.13
SEC13-218ENST00000490283 SPDYE7PQ495Y7 208 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 ZCCHC12Q6PEW1 402 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 SEM1Q6ZVN7 128 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 CHMP1BQ7LBR1 199 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 LIX1LQ8IVB5 337 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 DMRTC2Q8IXT2 367 aaPredicted RBP15.85■□□□□ 0.13
SEC13-218ENST00000490283 OR6Y1Q8NGX8 325 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 PIK3R3Q92569 461 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 CHMP6Q96FZ7 201 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 C3orf30Q96M34 536 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 ZNF559Q9BR84 538 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 DSN1Q9H410 356 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 ZCCHC3Q9NUD5 404 aaKnown RBP15.85■□□□□ 0.13
SEC13-218ENST00000490283 NTMQ9P121 344 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 ZNF629Q9UEG4 869 aaPredicted RBP15.85■□□□□ 0.13
SEC13-218ENST00000490283 RPH3AQ9Y2J0 694 aaPredicted RBP15.85■□□□□ 0.13
SEC13-218ENST00000490283 SNX8Q9Y5X2 465 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 CREBBPQ92793 2442 aa15.85■□□□□ 0.13
SEC13-218ENST00000490283 NCKAP5O14513 1909 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 GXYLT2A0PJZ3 443 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 MBD3L4A6NDZ8 208 aaPredicted RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 MBD3L3A6NE82 208 aaPredicted RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 MBD3L5A6NJ08 208 aaPredicted RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 FADS1O60427 444 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 NKX2-2O95096 273 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 HPGDP15428 266 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 HK1P19367 917 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 CAPN3P20807 821 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 EFNA1P20827 205 aaPredicted RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 ASCL1P50553 236 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 DGKQP52824 942 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 GFRA1P56159 465 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 WNT3P56703 355 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 C17orf67Q0P5P2 114 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 PTGR1Q14914 329 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 PDCD2Q16342 344 aaPredicted RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 RAET1LQ5VY80 246 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 CES4AQ5XG92 561 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 MFSD12Q6NUT3 480 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 COX18Q8N8Q8 333 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 OR7A2PQ8NGA2 310 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 MBD3L2Q8NHZ7 208 aaPredicted RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 FBXO30Q8TB52 745 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 OR5P2Q8WZ92 322 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 PGM2Q96G03 612 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 TM9SF2Q99805 663 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 PAIP2Q9BPZ3 127 aaKnown RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 ACBD3Q9H3P7 528 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 MCCC2Q9HCC0 563 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 NOP53Q9NZM5 478 aaKnown RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 KCNN3Q9UGI6 736 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.84■□□□□ 0.13
SEC13-218ENST00000490283 RAP2CQ9Y3L5 183 aa15.84■□□□□ 0.13
SEC13-218ENST00000490283 KRT16P08779 473 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 LAMP1P11279 417 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 CTSSP25774 331 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 UQCRC1P31930 480 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 OPRM1P35372 400 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 SLC1A6P48664 564 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 SMU1Q2TAY7 513 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 HHATQ5VTY9 493 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 MARCH3Q86UD3 253 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 ZNF781Q8N8C0 355 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 FADS6Q8N9I5 356 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 NAXEQ8NCW5 288 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 OR2M3Q8NG83 312 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 OR56A1Q8NGH5 318 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 GOT1L1Q8NHS2 421 aaPredicted RBP15.83■□□□□ 0.12
SEC13-218ENST00000490283 HOXB13Q92826 284 aaPredicted RBP15.83■□□□□ 0.12
SEC13-218ENST00000490283 ZFP3Q96NJ6 502 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 TUBA1CQ9BQE3 449 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 G6PC3Q9BUM1 346 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 NEUROD4Q9HD90 331 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 MED11Q9P086 117 aa15.83■□□□□ 0.12
SEC13-218ENST00000490283 FOXD3Q9UJU5 478 aaPredicted RBP15.83■□□□□ 0.12
SEC13-218ENST00000490283 FAF1Q9UNN5 650 aaPredicted RBP15.83■□□□□ 0.12
SEC13-218ENST00000490283 LINC01387J3KSC0 135 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 CFLARO15519 480 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 ITM2AO43736 263 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 ZIC3O60481 467 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 SOX30O94993 753 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 ANGPTL1O95841 491 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 TMIGD3P0DMS9 266 aaPredicted RBP15.82■□□□□ 0.12
SEC13-218ENST00000490283 ACP2P11117 423 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 PEPDP12955 493 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 POU3F2P20265 443 aaPredicted RBP15.82■□□□□ 0.12
SEC13-218ENST00000490283 LCN1P31025 176 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 STARP49675 285 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 LHX2P50458 406 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 RPL14P50914 215 aaKnown RBP15.82■□□□□ 0.12
SEC13-218ENST00000490283 EEFSECP57772 596 aaKnown RBP15.82■□□□□ 0.12
SEC13-218ENST00000490283 EMX2Q04743 252 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 STX3Q13277 289 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 BCL2A1Q16548 175 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.82■□□□□ 0.12
SEC13-218ENST00000490283 GRAMD1BQ3KR37 738 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 BHLHB9Q6PI77 547 aa15.82■□□□□ 0.12
SEC13-218ENST00000490283 ARSKQ6UWY0 536 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms