RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 KRTAP10-3P60369 221 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 MYL6P60660 151 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 CTAG1AP78358 180 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 OC90Q02509 493 aaPredicted RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SIGLEC14Q08ET2 396 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC39A6Q13433 755 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 GPR50Q13585 617 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 IL18Q14116 193 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 GK3PQ14409 553 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SF3B4Q15427 424 aaKnown RBP eCLIP2.81□□□□□ -1.968e-9■■■■■ 39.1
DEPDC1-204ENST00000489862 KLHL40Q2TBA0 621 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 BEX5Q5H9J7 111 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 CTSL3PQ5NE16 218 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 WLSQ5T9L3 541 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 C20orf194Q5TEA3 1177 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 FAM69BQ5VUD6 431 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 WSCD1Q658N2 575 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 PDPK2PQ6A1A2 396 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 NCAPH2Q6IBW4 605 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 OR4A47Q6IF82 309 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 RNASEKQ6P5S7 137 aaKnown RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF530Q6P9A1 599 aaPredicted RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 LRRC8BQ6P9F7 803 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 CORO6Q6QEF8 472 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 C19orf35Q6ZS72 473 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC24A5Q71RS6 500 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 PATL1Q86TB9 770 aaKnown RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 TPRA1Q86W33 373 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ODF3L1Q8IXM7 274 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 PARP8Q8N3A8 854 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 FBXL16Q8N461 479 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 COMMD1Q8N668 190 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 NECAB1Q8N987 351 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ASCC1Q8N9N2 400 aaKnown RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 OR2L3Q8NG85 312 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 OR4A15Q8NGL6 344 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF596Q8TC21 504 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 LKAAEAR1Q8TD35 194 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SPRYD4Q8WW59 207 aaPredicted RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 OR1E3Q8WZA6 343 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 LHX4Q969G2 390 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC35C1Q96A29 364 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 HAVCR1Q96D42 359 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 NXPE2Q96DL1 559 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 AMDHD1Q96NU7 426 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 DUX5Q96PT3 197 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ACCSQ96QU6 501 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ERGIC2Q96RQ1 377 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 NDUFAF3Q9BU61 184 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 TEKT3Q9BXF9 490 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 FRMD8P1Q9BZ68 369 aaPredicted RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 CSTL1Q9H114 145 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 LRMDAQ9H2I8 198 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 MTIF3Q9H2K0 278 aaKnown RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 DCTPP1Q9H773 170 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 TREM1Q9NP99 234 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ZFP57Q9NU63 452 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 UFSP2Q9NUQ7 469 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 C2orf42Q9NWW7 574 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SPHK1Q9NYA1 384 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 PIPOXQ9P0Z9 390 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 VANGL2Q9ULK5 521 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC9A8Q9Y2E8 581 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 GSTK1Q9Y2Q3 226 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 PTPRCP08575 1304 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 CEMIPQ8WUJ3 1361 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ADAMTS7Q9UKP4 1686 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 BTAF1O14981 1849 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ITGB4P16144 1822 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 DOCK7Q96N67 2140 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 LOC100653049A0A140TA62 436 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 LRRC30A6NM36 301 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF879B4DU55 563 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 HHLA1C9JL84 531 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 B4GAT1O43505 415 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 JAK2O60674 1132 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 NDUFS6O75380 124 aaKnown RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 KRT34O76011 436 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CRYGBP07316 175 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CT45A8P0DMV1 189 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CT45A9P0DMV2 189 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 ITGA2P17301 1181 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 ANXA13P27216 316 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PPP2R1BP30154 601 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 AXLP30530 894 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 RDXP35241 583 aaKnown RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 HTR2BP41595 481 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 HTR5AP47898 357 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CEBPDP49716 269 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 HLCSP50747 726 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 RAD23BP54727 409 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 RAG2P55895 527 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PITX1P78337 314 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PDE1BQ01064 536 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 EWSR1Q01844 656 aaKnown RBP eCLIP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 CEACAM7Q14002 265 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 TPD52L1Q16890 204 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 PARP6Q2NL67 630 aa2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF829Q3KNS6 432 aaPredicted RBP2.8□□□□□ -1.96
DEPDC1-204ENST00000489862 DCAF4L1Q3SXM0 396 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms