RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 RFXANKO14593 260 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MATN3O15232 486 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TCAPO15273 167 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MID1O15344 667 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SIGLEC5O15389 551 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PRODHO43272 600 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TXNL1O43396 289 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SMAD6O43541 496 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 AKR7A3O95154 331 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 LY86O95711 162 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 EGFP01133 1207 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 IFNA10P01566 189 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NFICP08651 508 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 UBBP0CG47 229 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 UBCP0CG48 685 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 COX5BP10606 129 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GNSP15586 552 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CTNNB1P35222 781 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ETV5P41161 510 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CDKN2CP42773 168 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CHRNA4P43681 627 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ASMTP46597 345 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ID4P47928 161 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SRP9P49458 86 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CSNK1EP49674 416 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RBP2P50120 134 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 HTR6P50406 440 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CDH4P55283 916 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 BPIFB3P59826 476 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RPS27AP62979 156 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 UBA52P62987 128 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RPL38P63173 70 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SELENOWP63302 87 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 JAG1P78504 1218 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SHC2P98077 582 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SPIBQ01892 262 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SIGLEC14Q08ET2 396 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 KRT33BQ14525 404 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PEA15Q15121 130 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 DUOXA1Q1HG43 343 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SUPT20HL1Q3ZLR7 823 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ATAT1Q5SQI0 421 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 DNLZQ5SXM8 178 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM69AQ5T7M9 428 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 OTUD1Q5VV17 481 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MRNIPQ6NTE8 343 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NCEH1Q6PIU2 408 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PAQR6Q6TCH4 344 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TMIGD1Q6UXZ0 262 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 OTOP2Q7RTS6 562 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MILR1Q7Z6M3 343 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ACOT1Q86TX2 421 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 LDB1Q86U70 411 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 VSIG10LQ86VR7 867 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TPRA1Q86W33 373 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PTOV1Q86YD1 416 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 GPSM1Q86YR5 675 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CRYBG2Q8N1P7 616 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM26EQ8N5C1 309 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 POMGNT2Q8NAT1 580 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 SYT14Q8NB59 555 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 C11orf65Q8NCR3 313 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TMEM185AQ8NFB2 350 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 OR8J1Q8NGP2 316 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 BAHD1Q8TBE0 780 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PNPLA2Q96AD5 504 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MRPL38Q96DV4 380 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CDKN2AIPNLQ96HQ2 116 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 C14orf144Q96I85 54 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 IL4I1Q96RQ9 567 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ABHD1Q96SE0 405 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MAP3K3Q99759 626 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PDCD2LQ9BRP1 358 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 WNT5BQ9H1J7 359 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RERGLQ9H628 205 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 REEP4Q9H6H4 257 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 WDR26Q9H7D7 661 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 LRTM1Q9HBL6 345 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ATP13A1Q9HD20 1204 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CHMP1AQ9HD42 196 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 C1GALT1Q9NS00 363 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MRPS18AQ9NVS2 196 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ASB6Q9NWX5 421 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TAS2R13Q9NYV9 303 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CFAP97Q9P2B7 532 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 MARCH4Q9P2E8 410 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF629Q9UEG4 869 aaPredicted RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 TESQ9UGI8 421 aaKnown RBP4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 FBXW11Q9UKB1 542 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 CLEC4AQ9UMR7 237 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 RAI2Q9Y5P3 530 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 PIAS3Q9Y6X2 628 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 DENND4AQ7Z401 1863 aa4.48□□□□□ -1.69
SNRNP40-206ENST00000489853 NAP1L6A6NFF2 107 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 E9PI62 339 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 PRRG1O14668 218 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 TM4SF5O14894 197 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 GSTZ1O43708 216 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ICOSLGO75144 302 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 RBBP9O75884 186 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms