RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GIMAP5Q96F15 307 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 ZBED6CLQ96FA7 236 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-206ENST00000489142 C16orf58Q96GQ5 468 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 PPP3R2Q96LZ3 170 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 G6PC3Q9BUM1 346 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 L3MBTL1Q9Y468 752 aa12.71□□□□□ -0.37
VTI1A-206ENST00000489142 NUP214P35658 2090 aaPredicted RBP12.71□□□□□ -0.38
VTI1A-206ENST00000489142 MBD3L4A6NDZ8 208 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 MBD3L3A6NE82 208 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 MBD3L5A6NJ08 208 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 CD8B2A6NJW9 211 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 CLCA1A8K7I4 914 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 SHISA8B8ZZ34 492 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 EEF1E1-BLOC1S5C9J1V9 151 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 CTIFO43310 598 aaKnown RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 EEF1E1O43324 174 aaKnown RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 TBX19O60806 448 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 HSPA4LO95757 839 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 LAMP1P11279 417 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 ASMTP46597 345 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 DGKQP52824 942 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 CLDN18P56856 261 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 B3GALT5-AS1P59052 145 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 FOXF2Q12947 444 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 CHI3L2Q15782 390 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 PDCD2Q16342 344 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 C6orf136Q5SQH8 315 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 CEP85LQ5SZL2 805 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 IL23RQ5VWK5 629 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 RAET1LQ5VY80 246 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 FIGNL1Q6PIW4 674 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 ENPP6Q6UWR7 440 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 ARSKQ6UWY0 536 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 APOOLQ6UXV4 268 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 ZAR1Q86SH2 424 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 UBQLNLQ8IYU4 475 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 FADS6Q8N9I5 356 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 GATSQ8NAP1 163 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 FNDC5Q8NAU1 212 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 SLC16A11Q8NCK7 471 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 OR6Y1Q8NGX8 325 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 MBD3L2Q8NHZ7 208 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 JADE3Q92613 823 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 NRGNQ92686 78 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 ZNF764Q96H86 408 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 ZIM3Q96PE6 472 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 MS4A4EQ96PG1 132 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 SH3GL2Q99962 352 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 CALHM2Q9HA72 323 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 FBXO34Q9NWN3 711 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 FAM120CQ9NX05 1096 aaKnown RBP12.7□□□□□ -0.38
VTI1A-206ENST00000489142 SNX8Q9Y5X2 465 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 AKAP9Q99996 3911 aa12.7□□□□□ -0.38
VTI1A-206ENST00000489142 TMEM114B3SHH9 223 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 H0YC42 278 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 KCNH1O95259 989 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 TMIGD3P0DMS9 266 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 CPN1P15169 458 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 ZNF708P17019 499 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 HK1P19367 917 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 MAPK1P28482 360 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 ASCL1P50553 236 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 RNF144AP50876 292 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 TPD52P55327 224 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 DSCR4P56555 118 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 DUSP5Q16690 384 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 CCNJQ5T5M9 372 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 MFSD12Q6NUT3 480 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 AAGABQ6PD74 315 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 R3HCC1LQ7Z5L2 792 aaKnown RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 CDH24Q86UP0 819 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 GCNT2Q8N0V5 402 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 ZNF781Q8N8C0 355 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 ZPLD1Q8TCW7 415 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 TUBGCP3Q96CW5 907 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 FAM120BQ96EK7 910 aaKnown RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 TBL1XR1Q9BZK7 514 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 C20orf27Q9GZN8 174 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 C3orf14Q9HBI5 128 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 SIRT3Q9NTG7 399 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 ACSS1Q9NUB1 689 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 KCNN3Q9UGI6 736 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 ATP6V1HQ9UI12 483 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 MRTO4Q9UKD2 239 aaKnown RBP12.69□□□□□ -0.38
VTI1A-206ENST00000489142 RAB21Q9UL25 225 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 ABCG2Q9UNQ0 655 aa12.69□□□□□ -0.38
VTI1A-206ENST00000489142 A0A1W2PRB8 838 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 ESPNB1AK53 854 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 H3BML4 177 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 SEC14L5O43304 696 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 EMC8O43402 210 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 NKX2-2O95096 273 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 ZWINTO95229 277 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 ANGPTL1O95841 491 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 C6orf47O95873 294 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 POU3F2P20265 443 aaPredicted RBP12.68□□□□□ -0.38
VTI1A-206ENST00000489142 BGNP21810 368 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 CTSSP25774 331 aa12.68□□□□□ -0.38
VTI1A-206ENST00000489142 SERPINB5P36952 375 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms