RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 NPIPA5A0A0B4J1W7 369 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 C21orf140B9A014 251 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 NPIPA7E9PJI5 369 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 G3V2T6 193 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 PDLIM1O00151 329 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 TNFRSF11BO00300 401 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 PEX12O00623 359 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 EI24O14681 340 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 SLC30A4O14863 429 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 HS6ST1O60243 411 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 RAD1O60671 282 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 DPM1O60762 260 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 UGT2B17O75795 530 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 RASAL1O95294 804 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 IL33O95760 270 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 LGI1O95970 557 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 IGKV1D-16P01601 117 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 CAPNS1P04632 268 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 NPIPA8P0DM63 369 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 HPGDP15428 266 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 RHCEP18577 417 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 FPR1P21462 350 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 RPS4Y1P22090 263 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 MMP11P24347 488 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 LCN1P31025 176 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 RRM2P31350 389 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 DNAJA1P31689 397 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 OTX2P32243 289 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 IFNA8P32881 189 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 DCTP40126 519 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 STAT5AP42229 794 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 YAP1P46937 504 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 NR0B1P51843 470 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 IST1P53990 364 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 AQP4P55087 323 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 CDH12P55289 794 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 SMIM11AP58511 58 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 RNF4P78317 190 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 DNASE1L3Q13609 305 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 TAF11Q15544 211 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 EXT1Q16394 746 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 NRF1Q16656 503 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 ZSWIM7Q19AV6 140 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 BTBD16Q32M84 506 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 OTUD3Q5T2D3 398 aaPredicted RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 RNF220Q5VTB9 566 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 SHQ1Q6PI26 577 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 ZNF836Q6ZNA1 936 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 ZAR1Q86SH2 424 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 STK32CQ86UX6 486 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 RANBP3LQ86VV4 465 aaPredicted RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 EPHX4Q8IUS5 362 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 KBTBD2Q8IY47 623 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 SLC34A3Q8N130 599 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 NFAM1Q8NET5 270 aaPredicted RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 OR5L2Q8NGL0 311 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 PHF10Q8WUB8 498 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 APOBEC4Q8WW27 367 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 OIT3Q8WWZ8 545 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 ADIPOR1Q96A54 375 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 EFHD2Q96C19 240 aaPredicted RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 HSPBAP1Q96EW2 488 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 EPYCQ99645 322 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 ARHGDIGQ99819 225 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 WDR77Q9BQA1 342 aaPredicted RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 MESP1Q9BRJ9 268 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 SEMA4CQ9C0C4 833 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 AMBRA1Q9C0C7 1298 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 NRSN2Q9GZP1 204 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 HOXD1Q9GZZ0 328 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 ZNF700Q9H0M5 742 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 Q9H521 79 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 NTN4Q9HB63 628 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 FBXO34Q9NWN3 711 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 KIF17Q9P2E2 1029 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 CNOT11Q9UKZ1 510 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 TCFL5Q9UL49 500 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 PPIEQ9UNP9 301 aaKnown RBP9.26□□□□□ -0.93
USP11-211ENST00000489111 PCDHGA10Q9Y5H3 936 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 ORC6Q9Y5N6 252 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 HS3ST3B1Q9Y662 390 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 AK5Q9Y6K8 562 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 U3KQV3 271 aa9.26□□□□□ -0.93
USP11-211ENST00000489111 IGHV1-45A0A0A0MS14 117 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 NSG1A0A0A6YYJ2 146 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 CENPVL1A0A0U1RR11 272 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 CDC14CA4D256 554 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 PRAMEF25A6NGN4 478 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 H0YJX3 145 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 SOCS2O14508 198 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 AP3D1O14617 1153 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 TO15178 435 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 GFRA3O60609 400 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 REM1O75628 298 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 ZFAND5O76080 213 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 GADD45GO95257 159 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 HPRP00739 348 aa9.25□□□□□ -0.93
USP11-211ENST00000489111 CD82P27701 267 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms