RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TM2D1Q9BX74 207 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 TBC1D10AQ9BXI6 508 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 IKZF5Q9H5V7 419 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 ECT2Q9H8V3 914 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 MIEF1Q9NQG6 463 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 RBM28Q9NW13 759 aaKnown RBP2.42□□□□□ -2.02
CD46-215ENST00000488596 ELOVL2Q9NXB9 296 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 TAS2R3Q9NYW6 316 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 ATP6V1HQ9UI12 483 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 VSIG4Q9Y279 399 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 USP6P35125 1406 aa2.42□□□□□ -2.02
CD46-215ENST00000488596 BICDL2A1A5D9 508 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 FAM74A7A6NL05 159 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 F8WDY8 70 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 TM9SF1O15321 606 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 CHADO15335 359 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 OR4F21O95013 312 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 DUSP14O95147 198 aaKnown RBP2.41□□□□□ -2.02
CD46-215ENST00000488596 CT45A10P0DMU9 189 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 UQCRBP14927 111 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 KLK2P20151 261 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 IGFBP5P24593 272 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 AXLP30530 894 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 ADRA1AP35348 466 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 DLSTP36957 453 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 NOVA1P51513 510 aaKnown RBP2.41□□□□□ -2.02
CD46-215ENST00000488596 KRTAP10-1P60331 282 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 NUCB2P80303 420 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 HTD2P86397 168 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 TGIF1Q15583 401 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 CAMK4Q16566 473 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 GSG1Q2KHT4 349 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 FAM74A3Q4VXF1 159 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 PAMR1Q6UXH9 720 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 CATSPER4Q7RTX7 472 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 HSCBQ8IWL3 235 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 ZBED8Q8IZ13 594 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 MCOLN2Q8IZK6 566 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 GCNT2Q8N0V5 402 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 GPD1LQ8N335 351 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 STKLD1Q8NE28 680 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 CCDC26Q8TAB7 109 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 MRAPQ8TCY5 172 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 ADAMTS16Q8TE57 1224 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 UPRTQ96BW1 309 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 DHTKD1Q96HY7 919 aaPredicted RBP2.41□□□□□ -2.02
CD46-215ENST00000488596 HPDLQ96IR7 371 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 CASD1Q96PB1 797 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 TMEM121Q9BTD3 319 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 TBCDQ9BTW9 1192 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 TSSK1BQ9BXA7 367 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 ELOVL4Q9GZR5 314 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 COMMD4Q9H0A8 199 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 RHOJQ9H4E5 214 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 LIN28AQ9H9Z2 209 aaKnown RBP2.41□□□□□ -2.02
CD46-215ENST00000488596 LPAR2Q9HBW0 351 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 ANKMY1Q9P2S6 941 aa2.41□□□□□ -2.02
CD46-215ENST00000488596 MTF2Q9Y483 593 aaPredicted RBP2.41□□□□□ -2.02
CD46-215ENST00000488596 ZNF318Q5VUA4 2279 aa2.4□□□□□ -2.02
CD46-215ENST00000488596 CCDC7Q96M83 1385 aa2.4□□□□□ -2.02
CD46-215ENST00000488596 IGHV3-35A0A0C4DH35 117 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 FAM168BA1KXE4 195 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 LRRC30A6NM36 301 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 A8MU10 97 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 K7EPI3 171 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 SLC17A2O00624 439 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 SMPD2O60906 423 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 AK1P00568 194 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 IFNB1P01574 187 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 ANXA3P12429 323 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 NCF1P14598 390 aaPredicted RBP2.4□□□□□ -2.03
CD46-215ENST00000488596 DPP4P27487 766 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 RPL4P36578 427 aaKnown RBP2.4□□□□□ -2.03
CD46-215ENST00000488596 GPC3P51654 580 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 PRKCEQ02156 737 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 PDZK1IP1Q13113 114 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 CYP51A1Q16850 503 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 CYBRD1Q53TN4 286 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 PAN3Q58A45 887 aaKnown RBP2.4□□□□□ -2.03
CD46-215ENST00000488596 MEDAGQ5VYS4 303 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 SLC22A10Q63ZE4 541 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 ASPHD2Q6ICH7 369 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 C2orf66Q6UXQ4 117 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 STAC2Q6ZMT1 411 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 LANCL3Q6ZV70 420 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 CBWD2Q8IUF1 395 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 CSNK1A1LQ8N752 337 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 CNIH3Q8TBE1 160 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 CCDC110Q8TBZ0 833 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 TAF4BQ92750 862 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 TBC1D31Q96DN5 1066 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 VSIG2Q96IQ7 327 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 SERAC1Q96JX3 654 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 SIGLEC12Q96PQ1 595 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 FICDQ9BVA6 458 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 NFKBIZQ9BYH8 718 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 DEFB126Q9BYW3 111 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 POLR3FQ9H1D9 316 aaPredicted RBP2.4□□□□□ -2.03
CD46-215ENST00000488596 SLC25A51Q9H1U9 297 aa2.4□□□□□ -2.03
CD46-215ENST00000488596 OPN3Q9H1Y3 402 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms