RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 ZNF564Q8TBZ8 553 aaPredicted RBP2.84□□□□□ -1.95
TTC3-220ENST00000487711 U2AF1L4Q8WU68 220 aaKnown RBP2.84□□□□□ -1.95
TTC3-220ENST00000487711 FAM122AQ96E09 287 aa2.84□□□□□ -1.95
TTC3-220ENST00000487711 DPH7Q9BTV6 452 aa2.84□□□□□ -1.95
TTC3-220ENST00000487711 TM2D1Q9BX74 207 aa2.84□□□□□ -1.95
TTC3-220ENST00000487711 TSSK1BQ9BXA7 367 aa2.84□□□□□ -1.95
TTC3-220ENST00000487711 ELOVL2Q9NXB9 296 aa2.84□□□□□ -1.95
TTC3-220ENST00000487711 MBD2Q9UBB5 411 aa2.84□□□□□ -1.95
TTC3-220ENST00000487711 BCAP29Q9UHQ4 241 aa2.84□□□□□ -1.95
TTC3-220ENST00000487711 TMCC3Q9ULS5 477 aa2.84□□□□□ -1.95
TTC3-220ENST00000487711 MTF2Q9Y483 593 aaPredicted RBP2.84□□□□□ -1.95
TTC3-220ENST00000487711 RAB3GAP2Q9H2M9 1393 aa2.84□□□□□ -1.96
TTC3-220ENST00000487711 SHANK2Q9UPX8 1470 aa2.84□□□□□ -1.96
TTC3-220ENST00000487711 CROCC2H7BZ55 1655 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 TOXO94900 526 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 IGFBP1P08833 259 aaPredicted RBP2.83□□□□□ -1.96
TTC3-220ENST00000487711 SLC35G4P0C7Q5 338 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 PTBP1P26599 531 aaKnown RBP eCLIP2.83□□□□□ -1.96
TTC3-220ENST00000487711 YBEYP58557 167 aaPredicted RBP2.83□□□□□ -1.96
TTC3-220ENST00000487711 RPS8P62241 208 aaKnown RBP2.83□□□□□ -1.96
TTC3-220ENST00000487711 HERVK_113P63132 956 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 ERVK-8P63133 956 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 DCAF4L1Q3SXM0 396 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 IL23RQ5VWK5 629 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 RAB12Q6IQ22 244 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 TAF8Q7Z7C8 310 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 ADGRD2Q7Z7M1 963 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 PARGQ86W56 976 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 TADA1Q96BN2 335 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 ERVK-6Q9BXR3 956 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 DUS2Q9NX74 493 aaKnown RBP2.83□□□□□ -1.96
TTC3-220ENST00000487711 TMEM9Q9P0T7 183 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 CLIP2Q9UDT6 1046 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 KCNN3Q9UGI6 736 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 DNPEPQ9ULA0 475 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 MTUS2Q5JR59 1369 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 TNRQ92752 1358 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 FHOD3Q2V2M9 1422 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 ADGRL2O95490 1459 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 EPRSP07814 1512 aaKnown RBP2.83□□□□□ -1.96
TTC3-220ENST00000487711 KDM5DQ9BY66 1539 aa2.83□□□□□ -1.96
TTC3-220ENST00000487711 EIF4G3O43432 1585 aaKnown RBP2.83□□□□□ -1.96
TTC3-220ENST00000487711 RAPGEF6Q8TEU7 1601 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 ZBTB14O43829 449 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 SEC22BO75396 215 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 B3GALNT1O75752 331 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 SERF1AO75920 110 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 PGK1P00558 417 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 PGK2P07205 417 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 PSMB1P20618 241 aaKnown RBP2.82□□□□□ -1.96
TTC3-220ENST00000487711 NF2P35240 595 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 OR3A4PP47883 348 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 RPS6P62753 249 aaKnown RBP2.82□□□□□ -1.96
TTC3-220ENST00000487711 ZP4Q12836 540 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 HACD2Q6Y1H2 254 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 MOB1BQ7L9L4 216 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 TSGA13Q96PP4 275 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 TMEM237Q96Q45 408 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 C19orf24Q9BVV8 132 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 GLT8D2Q9H1C3 349 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 ABCG8Q9H221 673 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 MEPEQ9NQ76 525 aaPredicted RBP2.82□□□□□ -1.96
TTC3-220ENST00000487711 GHRLQ9UBU3 117 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 MOSPD1Q9UJG1 213 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 ZNF490Q9ULM2 529 aaPredicted RBP2.82□□□□□ -1.96
TTC3-220ENST00000487711 PDE10AQ9Y233 779 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 CA5BQ9Y2D0 317 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 GRIN2DO15399 1336 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 SPAG9O60271 1321 aaKnown RBP2.82□□□□□ -1.96
TTC3-220ENST00000487711 USP6P35125 1406 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 NAIPQ13075 1403 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 ERCC6Q03468 1493 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 GRIN2AQ12879 1464 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 TEX14Q8IWB6 1497 aa2.82□□□□□ -1.96
TTC3-220ENST00000487711 CHD4Q14839 1912 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 RAI1Q7Z5J4 1906 aaPredicted RBP2.81□□□□□ -1.96
TTC3-220ENST00000487711 ARHGAP42A6NI28 874 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 SLC9B1P1A6NJY1 282 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 SLC4A1P02730 911 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 CXCL10P02778 98 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 HSPB1P04792 205 aaKnown RBP2.81□□□□□ -1.96
TTC3-220ENST00000487711 MGMTP16455 207 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 ELK1P19419 428 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 ZP3P21754 424 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 AHCYP23526 432 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 KIF5BP33176 963 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 UGT1A3P35503 534 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 DIO3P55073 304 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 MRPS6P82932 125 aaKnown RBP2.81□□□□□ -1.96
TTC3-220ENST00000487711 ZSWIM7Q19AV6 140 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 LRIT3Q3SXY7 679 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 CCDC40Q4G0X9 1142 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 SLX4IPQ5VYV7 408 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 DMKNQ6E0U4 476 aaPredicted RBP2.81□□□□□ -1.96
TTC3-220ENST00000487711 LEG1Q6P5S2 330 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 FAM159AQ6UWV7 190 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 OLFM4Q6UX06 510 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 WDR88Q6ZMY6 472 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 MIER3Q7Z3K6 550 aa2.81□□□□□ -1.96
TTC3-220ENST00000487711 C9orf40Q8IXQ3 194 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms