RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 SMNDC1O75940 238 aaKnown RBP eCLIP11□□□□□ -0.65
VPS16-208ENST00000487461 RSL1D1O76021 490 aaKnown RBP11□□□□□ -0.65
VPS16-208ENST00000487461 SLITRK5O94991 958 aa11□□□□□ -0.65
VPS16-208ENST00000487461 IGKV1D-16P01601 117 aa11□□□□□ -0.65
VPS16-208ENST00000487461 SHBGP04278 402 aa11□□□□□ -0.65
VPS16-208ENST00000487461 FOSL1P15407 271 aa11□□□□□ -0.65
VPS16-208ENST00000487461 NTSP30990 170 aa11□□□□□ -0.65
VPS16-208ENST00000487461 HOXC12P31275 282 aa11□□□□□ -0.65
VPS16-208ENST00000487461 GABRA3P34903 492 aa11□□□□□ -0.65
VPS16-208ENST00000487461 CLDN20P56880 219 aa11□□□□□ -0.65
VPS16-208ENST00000487461 DNAJB13P59910 316 aa11□□□□□ -0.65
VPS16-208ENST00000487461 RAET1LQ5VY80 246 aa11□□□□□ -0.65
VPS16-208ENST00000487461 OR2A2Q6IF42 318 aa11□□□□□ -0.65
VPS16-208ENST00000487461 APOOLQ6UXV4 268 aa11□□□□□ -0.65
VPS16-208ENST00000487461 FRMD7Q6ZUT3 714 aa11□□□□□ -0.65
VPS16-208ENST00000487461 ZNF551Q7Z340 670 aaPredicted RBP11□□□□□ -0.65
VPS16-208ENST00000487461 MEIOBQ8N635 442 aa11□□□□□ -0.65
VPS16-208ENST00000487461 CNEP1R1Q8N9A8 125 aa11□□□□□ -0.65
VPS16-208ENST00000487461 SMPDL3BQ92485 455 aa11□□□□□ -0.65
VPS16-208ENST00000487461 C1GALT1C1Q96EU7 318 aa11□□□□□ -0.65
VPS16-208ENST00000487461 PGM2Q96G03 612 aa11□□□□□ -0.65
VPS16-208ENST00000487461 OPN3Q9H1Y3 402 aaPredicted RBP11□□□□□ -0.65
VPS16-208ENST00000487461 Q9N2J8 555 aa11□□□□□ -0.65
VPS16-208ENST00000487461 DDX18Q9NVP1 670 aaKnown RBP11□□□□□ -0.65
VPS16-208ENST00000487461 FAM120CQ9NX05 1096 aaKnown RBP11□□□□□ -0.65
VPS16-208ENST00000487461 ABCG2Q9UNQ0 655 aa11□□□□□ -0.65
VPS16-208ENST00000487461 TESMINQ9Y4I5 508 aa11□□□□□ -0.65
VPS16-208ENST00000487461 H3BQF6 201 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 SIAH2O43255 324 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 SEC14L5O43304 696 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 PLIN3O60664 434 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 GLRA3O75311 464 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 SEC22BO75396 215 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 CRCPO75575 148 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 UTS2O95399 124 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 CGAP01215 116 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 UROSP10746 265 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 CRHR1P34998 444 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 CPOXP36551 454 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 RFX3P48380 749 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 PCYT1AP49585 367 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 EEFSECP57772 596 aaKnown RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 NAA20P61599 178 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 GANABQ14697 944 aaKnown RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 ZNHIT3Q15649 155 aaPredicted RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 GLYR1Q49A26 553 aaPredicted RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 CFAP157Q5JU67 520 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 CLEC6AQ6EIG7 209 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 ANKRD26P1Q6NSI1 321 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 IKBIPQ70UQ0 350 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 KRTAP1-3Q8IUG1 177 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 GSPT2Q8IYD1 628 aaKnown RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 KIF18AQ8NI77 898 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 PIK3R3Q92569 461 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 GFM2Q969S9 779 aaKnown RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 ZNF845Q96IR2 970 aaPredicted RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 PINK1Q9BXM7 581 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 PTGES2Q9H7Z7 377 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 NEUROD4Q9HD90 331 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 OXSMQ9NWU1 459 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 KLHL28Q9NXS3 571 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 C6orf203Q9P0P8 240 aaPredicted RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 MRTO4Q9UKD2 239 aaKnown RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 EIF3LQ9Y262 564 aaKnown RBP10.99□□□□□ -0.65
VPS16-208ENST00000487461 PTGDR2Q9Y5Y4 395 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 VPS13CQ709C8 3753 aa10.99□□□□□ -0.65
VPS16-208ENST00000487461 NIPBLQ6KC79 2804 aaeCLIP10.99□□□□□ -0.65
VPS16-208ENST00000487461 IGLV3-32A0A0A0MS00 114 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 DEFB108AA8MXU0 73 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 SHISA8B8ZZ34 492 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 H3BML4 177 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 LINC01387J3KSC0 135 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 CTIFO43310 598 aaKnown RBP10.98□□□□□ -0.65
VPS16-208ENST00000487461 GMFGO60234 142 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 ANGPTL1O95841 491 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 PRPS2P11908 318 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 CPA3P15088 417 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 PRPH2P23942 346 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 CD79BP40259 229 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 MAP3K8P41279 467 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 CCT5P48643 541 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 CLK3P49761 638 aaKnown RBP10.98□□□□□ -0.65
VPS16-208ENST00000487461 SIRPAP78324 504 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 PRR5P85299 388 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 TMEM44Q2T9K0 475 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 GRAMD1BQ3KR37 738 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 CCDC153Q494R4 210 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 Q6ZSR9 355 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 EXOC3L1Q86VI1 746 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 CXorf67Q86X51 503 aaPredicted RBP10.98□□□□□ -0.65
VPS16-208ENST00000487461 ZNF610Q8N9Z0 462 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 OR2T11Q8NH01 316 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 FNDC9Q8TBE3 224 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 HOXB13Q92826 284 aaPredicted RBP10.98□□□□□ -0.65
VPS16-208ENST00000487461 CIDECQ96AQ7 238 aaPredicted RBP10.98□□□□□ -0.65
VPS16-208ENST00000487461 METTL2AQ96IZ6 378 aaKnown RBP10.98□□□□□ -0.65
VPS16-208ENST00000487461 FAM111AQ96PZ2 611 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 SMR3AQ99954 134 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 PIGQQ9BRB3 760 aa10.98□□□□□ -0.65
VPS16-208ENST00000487461 RNF122Q9H9V4 155 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 259.5 ms