RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.46□□□□□ -0.73
NUP50-216ENST00000486184 ARHGAP11BQ3KRB8 267 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 PLEKHN1Q494U1 663 aaPredicted RBP10.46□□□□□ -0.73
NUP50-216ENST00000486184 FLYWCH1Q4VC44 716 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 RUNDC3AQ59EK9 446 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 COX20Q5RI15 118 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 EXOSC6Q5RKV6 272 aaKnown RBP10.46□□□□□ -0.73
NUP50-216ENST00000486184 GCNT6Q5T4J0 391 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 FAM91A1Q658Y4 838 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 SLC30A6Q6NXT4 461 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 FAM180AQ6UWF9 173 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 ARPINQ7Z6K5 226 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 PACS2Q86VP3 889 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 MSRB3Q8IXL7 192 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 FITM2Q8N6M3 262 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 HGDQ93099 445 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 JSRP1Q96MG2 331 aaPredicted RBP10.46□□□□□ -0.73
NUP50-216ENST00000486184 FAM173AQ9BQD7 235 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 CPPED1Q9BRF8 314 aaPredicted RBP10.46□□□□□ -0.73
NUP50-216ENST00000486184 DOHHQ9BU89 302 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 OSBPL11Q9BXB4 747 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 HES7Q9BYE0 225 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 TBL1XR1Q9BZK7 514 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 HOXD1Q9GZZ0 328 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 SDHAF3Q9NRP4 125 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 CALML5Q9NZT1 146 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 BOKQ9UMX3 212 aaPredicted RBP10.46□□□□□ -0.73
NUP50-216ENST00000486184 ABCG2Q9UNQ0 655 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 L3MBTL1Q9Y468 752 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 WDR45Q9Y484 360 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 KCNE3Q9Y6H6 103 aa10.46□□□□□ -0.73
NUP50-216ENST00000486184 TTLL8A6PVC2 850 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 H3BNH8 94 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 ACOT7O00154 380 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 SCO2O43819 266 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 SNX4O95219 450 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 IGKV1D-16P01601 117 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 BCHEP06276 602 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 EVI2BP34910 448 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 CASP3P42574 277 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 CPA2P48052 419 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 MEOX1P50221 254 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 CRISP3P54108 245 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 PRSS12P56730 875 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 SNTA1Q13424 505 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 KRT72Q14CN4 511 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 GPR68Q15743 365 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 HEPHL1Q6MZM0 1159 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 NANOGP8Q6NSW7 305 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 RPUSD3Q6P087 351 aaKnown RBP10.45□□□□□ -0.74
NUP50-216ENST00000486184 TRPM8Q7Z2W7 1104 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.45□□□□□ -0.74
NUP50-216ENST00000486184 ZNF227Q86WZ6 799 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 SULF2Q8IWU5 870 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 ZNF614Q8N883 585 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 CHDHQ8NE62 594 aaPredicted RBP10.45□□□□□ -0.74
NUP50-216ENST00000486184 OR8J3Q8NGG0 315 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 FAM110BQ8TC76 370 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 DTNBP1Q96EV8 351 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 ZNF597Q96LX8 424 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 TRNT1Q96Q11 434 aaKnown RBP10.45□□□□□ -0.74
NUP50-216ENST00000486184 NODALQ96S42 347 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 SDF2Q99470 211 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 HOPXQ9BPY8 73 aaPredicted RBP10.45□□□□□ -0.74
NUP50-216ENST00000486184 ECSITQ9BQ95 431 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 SLC39A3Q9BRY0 314 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 NANOGQ9H9S0 305 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 HHATLQ9HCP6 504 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 POLE3Q9NRF9 147 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 UBQLN4Q9NRR5 601 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 NDE1Q9NXR1 346 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 B4GALT7Q9UBV7 327 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 AP3M1Q9Y2T2 418 aa10.45□□□□□ -0.74
NUP50-216ENST00000486184 IGSF10Q6WRI0 2623 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 ANKRD33BA6NCL7 494 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 H6PDO95479 791 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 CRYABP02511 175 aaKnown RBP10.44□□□□□ -0.74
NUP50-216ENST00000486184 C1QCP02747 245 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 GPX2P18283 190 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 DCTP40126 519 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 DNASE1L1P49184 302 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 MVDP53602 400 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 CBX1P83916 185 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 SYPL1Q16563 259 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 ZNF630Q2M218 657 aaPredicted RBP10.44□□□□□ -0.74
NUP50-216ENST00000486184 GRAMD1BQ3KR37 738 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 COLEC12Q5KU26 742 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 BICRALQ6AI39 1079 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 DESI1Q6ICB0 168 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 TMEM81Q6P7N7 255 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 HACD2Q6Y1H2 254 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 POGLUT1Q8NBL1 392 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 OR2M7Q8NG81 312 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 GRHL3Q8TE85 626 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 NSL1Q96IY1 281 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 ANGPTL4Q9BY76 406 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 TRIM8Q9BZR9 551 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 ZNF350Q9GZX5 532 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 SH2D2AQ9NP31 389 aa10.44□□□□□ -0.74
NUP50-216ENST00000486184 A4GALTQ9NPC4 353 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms