RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 HMGN4O00479 90 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 GABRPO00591 440 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 CASC3O15234 703 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 FABP7O15540 132 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TLX2O43763 284 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SNAPC5O75971 98 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OR7A10O76100 309 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC16A8O95907 504 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 IFNA7P01567 189 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 IL3P08700 152 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SULT1A3P0DMM9 295 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SULT1A4P0DMN0 295 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 C1GALT1C1LP0DN25 315 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OR12D1P0DN82 309 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SRFP11831 508 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 IFI30P13284 250 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 UGT2B7P16662 529 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ELK1P19419 428 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 NPR2P20594 1047 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 DDCP20711 480 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ZP3P21754 424 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 MMP11P24347 488 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TRHRP34981 398 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 THBS2P35442 1172 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 AVPR1BP47901 424 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 MTNR1AP48039 350 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC6A11P48066 632 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC11A1P49279 550 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 INPP1P49441 399 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 PRLHRP49683 370 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ARFIP1P53367 373 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ARPP19P56211 112 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SNRPD1P62314 119 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TBPL1P62380 186 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 RNF4P78317 190 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SNTA1Q13424 505 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 IL18Q14116 193 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 AANATQ16613 207 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 FAM214AQ32MH5 1076 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SYTL3Q4VX76 610 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 KLHL12Q53G59 568 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 FBLN7Q53RD9 439 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 MPP7Q5T2T1 576 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 NDUFAF5Q5TEU4 345 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OR2G6Q5TZ20 316 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 AADACL4Q5VUY2 407 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 PRAMEF8Q5VWM4 474 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 PRAMEF7Q5VXH5 474 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ACSM5Q6NUN0 579 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC27A4Q6P1M0 643 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 FAM122CQ6P4D5 195 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 C22orf39Q6P5X5 142 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 PODNL1Q6PEZ8 512 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 BAIAP2L2Q6UXY1 529 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TMIGD1Q6UXZ0 262 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 DEF8Q6ZN54 512 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 RASSF6Q6ZTQ3 369 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 GET4Q7L5D6 327 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 KCTD20Q7Z5Y7 419 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ABI3BPQ7Z7G0 1075 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ZER1Q7Z7L7 766 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TMPRSS11BQ86T26 416 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 LUZP2Q86TE4 346 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OAFQ86UD1 273 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 COMMD7Q86VX2 200 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 MARCH9Q86YJ5 346 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 CMIPQ8IY22 773 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 APCDD1Q8J025 514 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 CPXM2Q8N436 756 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 KLHL36Q8N4N3 616 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TBC1D19Q8N5T2 526 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TRAM1L1Q8N609 369 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 HORMAD2Q8N7B1 307 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TOR1AIP2Q8NFQ8 470 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 DBF4BQ8NFT6 615 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 NLGN2Q8NFZ4 835 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OR11H7Q8NGC8 314 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OR4K5Q8NGD3 323 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OR8H1Q8NGG4 311 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OR4D11Q8NGI4 311 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OR5AK3PQ8NH89 298 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 NEIL3Q8TAT5 605 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TEX47Q8TBZ9 253 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SKA2Q8WVK7 121 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SMG7Q92540 1137 aaKnown RBP4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 RFKQ969G6 155 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 NEIL2Q969S2 332 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM203Q969S6 136 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 RFT1Q96AA3 541 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 OMA1Q96E52 524 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 LCORQ96JN0 433 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 LMLNQ96KR4 655 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 CAMK1GQ96NX5 476 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 NECTIN4Q96NY8 510 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC38A2Q96QD8 506 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF607Q96SK3 696 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 TM9SF2Q99805 663 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 PTPN18Q99952 460 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ZSCAN5AQ9BUG6 496 aa4.39□□□□□ -1.71
SMARCC1-206ENST00000485737 ACAT2Q9BWD1 397 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms