RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	SLC9A8	Q9Y2E8	581 aa		3.35	□□□□□ -1.87
FN1-222	ENST00000485567	FKBP7	Q9Y680	259 aa		3.35	□□□□□ -1.87
FN1-222	ENST00000485567	MAP3K19	Q56UN5	1328 aa		3.35	□□□□□ -1.87
FN1-222	ENST00000485567	CENPJ	Q9HC77	1338 aa	Predicted RBP	3.35	□□□□□ -1.87
FN1-222	ENST00000485567	PARD3	Q8TEW0	1356 aa		3.35	□□□□□ -1.87
FN1-222	ENST00000485567	FBLL1	A6NHQ2	334 aa	Known RBP	3.34	□□□□□ -1.87
FN1-222	ENST00000485567	PDHX	O00330	501 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	XPO1	O14980	1071 aa	Known RBP	3.34	□□□□□ -1.87
FN1-222	ENST00000485567	ZG16	O60844	167 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	CIB2	O75838	187 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	YEATS4	O95619	227 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	SERPINA3	P01011	423 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	IL1B	P01584	269 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	CA3	P07451	260 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	IQCF3	P0C7M6	154 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	OR9G9	P0C7N8	305 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	UQCRFS1P1	P0C7P4	283 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	DRD5	P21918	477 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	MT3	P25713	68 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	BMI1	P35226	326 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	SAA4	P35542	130 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	PTGFR	P43088	359 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	NDUFV3	P56181	108 aa	Known RBP	3.34	□□□□□ -1.87
FN1-222	ENST00000485567	NOP14	P78316	857 aa	Known RBP	3.34	□□□□□ -1.87
FN1-222	ENST00000485567	IL9R	Q01113	521 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	SRY	Q05066	204 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	RFTN1	Q14699	578 aa	Predicted RBP	3.34	□□□□□ -1.87
FN1-222	ENST00000485567	CD226	Q15762	336 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	ZNF311	Q5JNZ3	666 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	LINC00242	Q5T6M2	205 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	PMF1	Q6P1K2	205 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	NIPAL3	Q6P499	406 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	SLC39A4	Q6P5W5	647 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	STOX1	Q6ZVD7	989 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	P4HA3	Q7Z4N8	544 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	LHFPL4	Q7Z7J7	247 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	CBWD2	Q8IUF1	395 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	GRAMD2A	Q8IUY3	354 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	LRRC49	Q8IUZ0	686 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	CCDC71	Q8IV32	467 aa	Predicted RBP	3.34	□□□□□ -1.87
FN1-222	ENST00000485567	TRIML2	Q8N7C3	387 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	OR9A1P	Q8NGU1	263 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	STARD8	Q92502	1023 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	NT5C3B	Q969T7	300 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	C19orf60	Q96EN9	201 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	TPD52L3	Q96J77	140 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	VSTM2L	Q96N03	204 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	CCT7	Q99832	543 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	TRIM51	Q9BSJ1	452 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	ST6GALNAC5	Q9BVH7	336 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	OCR1	Q9BZK8	76 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	TUBB1	Q9H4B7	451 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	SYNDIG1	Q9H7V2	258 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	WDR76	Q9H967	626 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	ELL3	Q9HB65	397 aa	Predicted RBP	3.34	□□□□□ -1.87
FN1-222	ENST00000485567	POLD4	Q9HCU8	107 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	AGPAT3	Q9NRZ7	376 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	KLRF1	Q9NZS2	232 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	MDFIC	Q9P1T7	246 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	GHRL	Q9UBU3	117 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	SEC14L4	Q9UDX3	406 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	KIAA1257	Q9ULG3	409 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	MGAT4A	Q9UM21	535 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	KLF2	Q9Y5W3	355 aa	Predicted RBP	3.34	□□□□□ -1.87
FN1-222	ENST00000485567	AUP1	Q9Y679	476 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	COMMD3-BMI1	R4GMX3	469 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	SALL1	Q9NSC2	1324 aa		3.34	□□□□□ -1.87
FN1-222	ENST00000485567	CARMIL1	Q5VZK9	1371 aa		3.34	□□□□□ -1.88
FN1-222	ENST00000485567	C15orf38-AP3S2	A0A0A6YYH1	394 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567		A0A0J9YVX5	310 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	LOC100653049	A0A140TA62	436 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	TTC26	A0AVF1	554 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	NDUFAF8	A1L188	74 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	LRIT2	A6NDA9	550 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	EPM2A	B3EWF7	344 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	WASH3P	C4AMC7	463 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567		H0Y8G0	127 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	NDUFS8	O00217	210 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	IMPA2	O14732	288 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	ALOX15B	O15296	676 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	RANBP6	O60518	1105 aa	Known RBP	3.33	□□□□□ -1.88
FN1-222	ENST00000485567	DNAJB6	O75190	326 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	KRT34	O76011	436 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	SORBS2	O94875	1100 aa	Known RBP	3.33	□□□□□ -1.88
FN1-222	ENST00000485567	OR4F21	O95013	312 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	IGSF6	O95976	241 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	GOT2	P00505	430 aa	Known RBP	3.33	□□□□□ -1.88
FN1-222	ENST00000485567	FCGR3A	P08637	254 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	ANXA4	P09525	319 aa	Predicted RBP	3.33	□□□□□ -1.88
FN1-222	ENST00000485567	HOXB7	P09629	217 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	UBTFL6	P0CB48	400 aa	Predicted RBP	3.33	□□□□□ -1.88
FN1-222	ENST00000485567	CCDC130	P13994	396 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	PAICS	P22234	425 aa	Known RBP	3.33	□□□□□ -1.88
FN1-222	ENST00000485567	CALML3	P27482	149 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	PPP2R1B	P30154	601 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	LONP1	P36776	959 aa	Known RBP	3.33	□□□□□ -1.88
FN1-222	ENST00000485567	CAPG	P40121	348 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	SLC1A4	P43007	532 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	NAPA	P54920	295 aa		3.33	□□□□□ -1.88
FN1-222	ENST00000485567	CCDC173	Q0VFZ6	552 aa		3.33	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms