RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	SEC22B	O75396	215 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	RSL1D1	O76021	490 aa	Known RBP	11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	KCNH1	O95259	989 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	CHEK2	O96017	543 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	FAM153B	P0C7A2	387 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	ZNF708	P17019	499 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	FOXA1	P55317	472 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	PSG6	Q00889	435 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	POU4F3	Q15319	338 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	BCL2A1	Q16548	175 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	FAM153C	Q494X1	144 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	NOXRED1	Q6NXP6	359 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	PLXDC2	Q6UX71	529 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	FRMD7	Q6ZUT3	714 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	IKBIP	Q70UQ0	350 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	KRTAP1-3	Q8IUG1	177 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	ZFP28	Q8NHY6	868 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	SMPDL3B	Q92485	455 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	DACH2	Q96NX9	599 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	FAM111A	Q96PZ2	611 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	SMR3A	Q99954	134 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	MED11	Q9P086	117 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	STOML1	Q9UBI4	398 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	FREM1	Q5H8C1	2179 aa		11.99	□□□□□ -0.49
UBA3-210	ENST00000485424	FBN3	Q75N90	2809 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424		A0A1W2PPR1	153 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	TTC36	A6NLP5	189 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	LINC01387	J3KSC0	135 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	COPE	O14579	308 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	SEC14L5	O43304	696 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	CRH	P06850	196 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	UROS	P10746	265 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	HOXC12	P31275	282 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	KCNJ5	P48544	419 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	CLDN18	P56856	261 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	RPS3A	P61247	264 aa	Known RBP	11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	HSPB3	Q12988	150 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	SGCB	Q16585	318 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	FAM71E1	Q6IPT2	247 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	PPP4R4	Q6NUP7	873 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	BIVM	Q86UB2	503 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	OR2M3	Q8NG83	312 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	PIGQ	Q9BRB3	760 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	GLIPR2	Q9H4G4	154 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	PPCS	Q9HAB8	311 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	HHATL	Q9HCP6	504 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	EQTN	Q9NQ60	294 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	FIS1	Q9Y3D6	152 aa		11.98	□□□□□ -0.49
UBA3-210	ENST00000485424	CSPG4	Q6UVK1	2322 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424		A0A1W2PNV4	684 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424		G3V2L1	256 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	UPK1A	O00322	258 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	UBFD1	O14562	309 aa	Known RBP	11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	MSTN	O14793	375 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	PDPK1	O15530	556 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	HCRTR2	O43614	444 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	GMFG	O60234	142 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	ZIC3	O60481	467 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	PROC	P04070	461 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	HRG	P04196	525 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	CPA3	P15088	417 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	DDX5	P17844	614 aa	Known RBP	11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	GABRA3	P34903	492 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	PRKAG1	P54619	331 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	GAS1	P54826	345 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	DNAJB13	P59910	316 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	SIRPA	P78324	504 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	LTB	Q06643	244 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	C17orf67	Q0P5P2	114 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	VPS26B	Q4G0F5	336 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	LIPM	Q5VYY2	423 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	TRIM46	Q7Z4K8	759 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	ADGRE4P	Q86SQ3	457 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	HOMEZ	Q8IX15	550 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	GSPT2	Q8IYD1	628 aa	Known RBP	11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	OR2L13	Q8N349	312 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	CEP70	Q8NHQ1	597 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	GPR151	Q8TDV0	419 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	GFM2	Q969S9	779 aa	Known RBP	11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	TRIM44	Q96DX7	344 aa	Predicted RBP	11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	ELP4	Q96EB1	424 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	C11orf24	Q96F05	449 aa	Predicted RBP	11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	PGM2	Q96G03	612 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	METTL2A	Q96IZ6	378 aa	Known RBP	11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	C18orf12	Q96KH6	178 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	AMDHD1	Q96NU7	426 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	SLC39A3	Q9BRY0	314 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	PINK1	Q9BXM7	581 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	PRRG4	Q9BZD6	226 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	NEUROD4	Q9HD90	331 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	C1orf109	Q9NX04	203 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	FAM120C	Q9NX05	1096 aa	Known RBP	11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	ZNF226	Q9NYT6	803 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	TAS2R7	Q9NYW3	318 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	EMCN	Q9ULC0	261 aa		11.97	□□□□□ -0.49
UBA3-210	ENST00000485424	MXRA5	Q9NR99	2828 aa		11.96	□□□□□ -0.49
UBA3-210	ENST00000485424		A8MXE2	369 aa		11.96	□□□□□ -0.49
UBA3-210	ENST00000485424	PLIN3	O60664	434 aa		11.96	□□□□□ -0.49
UBA3-210	ENST00000485424	UTS2	O95399	124 aa		11.96	□□□□□ -0.49

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