RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 HNRNPCL1O60812 293 aaKnown RBP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 ICOSLGO75144 302 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 STX11O75558 287 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 GCM2O75603 506 aaPredicted RBP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 PDE5AO76074 875 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 FAM87AP0C7U9 286 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 NAGAP17050 411 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 CYB561P49447 251 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 HLCSP50747 726 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 RASSF2P50749 326 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 LACTB2Q53H82 288 aaPredicted RBP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 BICRALQ6AI39 1079 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 IGFL2Q6UWQ7 119 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 LRRC74BQ6ZQY2 392 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 CYP4Z2PQ8N1L4 340 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 C11orf65Q8NCR3 313 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 HAS2Q92819 552 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 HGDQ93099 445 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 REXO5Q96IC2 774 aaKnown RBP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 COL21A1Q96P44 957 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 KCTD14Q9BQ13 255 aaPredicted RBP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 TREX2Q9BQ50 279 aaPredicted RBP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 UTP23Q9BRU9 249 aaKnown RBP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 G6PC3Q9BUM1 346 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 ABI3Q9P2A4 366 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 EGFL7Q9UHF1 273 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 KCNE5Q9UJ90 142 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 MRTO4Q9UKD2 239 aaKnown RBP12.98□□□□□ -0.33
SRSF6-202ENST00000483871 EXPH5Q8NEV8 1989 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 OR6C70A6NIJ9 312 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 FAM220BPB1ANY3 271 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 MKRN2OSH3BPM6 223 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 ABCB7O75027 752 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 NEURL1O76050 574 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 PGM3O95394 542 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 UTS2O95399 124 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 AK1P00568 194 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 ATP6V1C1P21283 382 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 CRISP3P54108 245 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 PSMD4P55036 377 aaKnown RBP12.97□□□□□ -0.33
SRSF6-202ENST00000483871 ARG2P78540 354 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 ZNF630Q2M218 657 aaPredicted RBP12.97□□□□□ -0.33
SRSF6-202ENST00000483871 GRAMD1BQ3KR37 738 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 DNAL1Q4LDG9 190 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 FLYWCH1Q4VC44 716 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 SAMD4BQ5PRF9 694 aaKnown RBP12.97□□□□□ -0.33
SRSF6-202ENST00000483871 APOOLQ6UXV4 268 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 HPS6Q86YV9 775 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 MICU2Q8IYU8 434 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 ARHGAP9Q9BRR9 750 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 RSPO3Q9BXY4 272 aaPredicted RBP12.97□□□□□ -0.33
SRSF6-202ENST00000483871 HES7Q9BYE0 225 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 RTN4RQ9BZR6 473 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 SAP130Q9H0E3 1048 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 PCDHAC1Q9H158 963 aa12.97□□□□□ -0.33
SRSF6-202ENST00000483871 CHCHD2Q9Y6H1 151 aaPredicted RBP12.97□□□□□ -0.33
SRSF6-202ENST00000483871 C2orf72A6NCS6 295 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 OR5H15A6NDH6 313 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 TMEM247A6NEH6 219 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 ERICH4A6NGS2 130 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 C17orf51A8MQB3 221 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 C5orf58C9J3I9 102 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 UGT2B17O75795 530 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 DNAJC8O75937 253 aaPredicted RBP12.96□□□□□ -0.33
SRSF6-202ENST00000483871 CCL3P10147 92 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 NCK1P16333 377 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 TMED10P49755 219 aaKnown RBP12.96□□□□□ -0.33
SRSF6-202ENST00000483871 HPCAP84074 193 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 RBBP4Q09028 425 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 OR1C1Q15619 314 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 MAPK14Q16539 360 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 PRAMEF20Q5VT98 475 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 REEP3Q6NUK4 255 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 ASRGL1Q7L266 308 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 NUP54Q7Z3B4 507 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 ZNF619Q8N2I2 560 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 HIPK4Q8NE63 616 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 GRHL3Q8TE85 626 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 TTC9Q92623 222 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 TRIM45Q9H8W5 580 aaPredicted RBP12.96□□□□□ -0.33
SRSF6-202ENST00000483871 ZNF71Q9NQZ8 489 aaPredicted RBP12.96□□□□□ -0.33
SRSF6-202ENST00000483871 TP53TG5Q9Y2B4 290 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 AP3M1Q9Y2T2 418 aa12.96□□□□□ -0.33
SRSF6-202ENST00000483871 CLDN24A6NM45 220 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 G3V3Y1 287 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 DNAJA2O60884 412 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 OXSR1O95747 527 aaPredicted RBP12.96□□□□□ -0.34
SRSF6-202ENST00000483871 HSD17B1P14061 328 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 PGM1P36871 562 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 DCTP40126 519 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 PSPHP78330 225 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 ZNF614Q8N883 585 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 PAQR8Q8TEZ7 354 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 FIG4Q92562 907 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 SPATA9Q9BWV2 254 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.96□□□□□ -0.341e-21■■■□□ 15.8
SRSF6-202ENST00000483871 LRMDAQ9H2I8 198 aa12.96□□□□□ -0.34
SRSF6-202ENST00000483871 MTHFD2LQ9H903 347 aaPredicted RBP12.96□□□□□ -0.34
SRSF6-202ENST00000483871 GALNT9Q9HCQ5 603 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms