RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 NPPAP01160 153 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 P04436 131 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 CHRM4P08173 479 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 CD46P15529 392 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 AQP1P29972 269 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 RFC3P40938 356 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 TNFSF10P50591 281 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 PSMD4P55036 377 aaKnown RBP12.15□□□□□ -0.46
HDAC1-208ENST00000482310 PMP22Q01453 160 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 ARHGAP11BQ3KRB8 267 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 ZNF766Q5HY98 468 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 IGFL2Q6UWQ7 119 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 GALNTL5Q7Z4T8 443 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 DEFB107AQ8IZN7 70 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 RBM15BQ8NDT2 890 aaKnown RBP12.15□□□□□ -0.46
HDAC1-208ENST00000482310 PSD4Q8NDX1 1056 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 MDS2Q8NDY4 140 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 OR8J3Q8NGG0 315 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 HAS2Q92819 552 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 HGDQ93099 445 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 TMEM19Q96HH6 336 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 SDF2Q99470 211 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 QRSL1Q9H0R6 528 aaKnown RBP12.15□□□□□ -0.46
HDAC1-208ENST00000482310 RUBCNLQ9H714 662 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 GALNT9Q9HCQ5 603 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 TIMMDC1Q9NPL8 285 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 CMTM6Q9NX76 183 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 WDR45Q9Y484 360 aa12.15□□□□□ -0.46
HDAC1-208ENST00000482310 PRRC2CQ9Y520 2896 aaKnown RBP12.15□□□□□ -0.46
HDAC1-208ENST00000482310 CFAP46Q8IYW2 2715 aa12.15□□□□□ -0.47
HDAC1-208ENST00000482310 CENPVL1A0A0U1RR11 272 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 PRAMEF25A6NGN4 478 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 OR6C70A6NIJ9 312 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 C17orf51A8MQB3 221 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 FCMRO60667 390 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 TNFRSF21O75509 655 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 STX11O75558 287 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 ARAFP10398 606 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 GPX2P18283 190 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 TCN1P20061 433 aaPredicted RBP12.14□□□□□ -0.47
HDAC1-208ENST00000482310 EVI2BP34910 448 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 DCTP40126 519 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 DNASE1L1P49184 302 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 PNLIPRP2P54317 469 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 CHRNEQ04844 493 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SCARB2Q14108 478 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 EFR3AQ14156 821 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF169Q14929 603 aaPredicted RBP12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SLC22A10Q63ZE4 541 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 TYW3Q6IPR3 259 aaKnown RBP12.14□□□□□ -0.47
HDAC1-208ENST00000482310 HEPHL1Q6MZM0 1159 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 C16orf89Q6UX73 402 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 HACD2Q6Y1H2 254 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 GPALPP1Q8IXQ4 340 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SLC15A3Q8IY34 581 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SPPL2AQ8TCT8 520 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SLC38A5Q8WUX1 472 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 TMCO6Q96DC7 493 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SH3GL1Q99961 368 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 GPATCH1Q9BRR8 931 aaKnown RBP12.14□□□□□ -0.47
HDAC1-208ENST00000482310 G6PC3Q9BUM1 346 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 RNF32Q9H0A6 362 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SLC25A18Q9H1K4 315 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 KAT8Q9H7Z6 458 aaKnown RBP12.14□□□□□ -0.47
HDAC1-208ENST00000482310 SACM1LQ9NTJ5 587 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 TUBD1Q9UJT1 453 aa12.14□□□□□ -0.47
HDAC1-208ENST00000482310 CHCHD2Q9Y6H1 151 aaPredicted RBP12.14□□□□□ -0.47
HDAC1-208ENST00000482310 ASH1LQ9NR48 2969 aaKnown RBP12.14□□□□□ -0.47
HDAC1-208ENST00000482310 FLNBO75369 2602 aaKnown RBP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 C15orf38-AP3S2A0A0A6YYH1 394 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 GNB5O14775 395 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 OXSR1O95747 527 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 AK1P00568 194 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 SP1P08047 785 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 HPGDP15428 266 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 MNAT1P51948 309 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 CRISP3P54108 245 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 KCNJ2P63252 427 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 CDK6Q00534 326 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 LIPEQ05469 1076 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 INPP5JQ15735 1006 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 MAPK11Q15759 364 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 SLC6A19Q695T7 634 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 OR5M10Q6IEU7 315 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 SLC25A25Q6KCM7 469 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 C8orf82Q6P1X6 216 aaPredicted RBP12.13□□□□□ -0.47
HDAC1-208ENST00000482310 FRRS1Q6ZNA5 592 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 NUP54Q7Z3B4 507 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 ARPINQ7Z6K5 226 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 MARCH3Q86UD3 253 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 PTOV1Q86YD1 416 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 ZZZ3Q8IYH5 903 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 ZNF619Q8N2I2 560 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 FBXW8Q8N3Y1 598 aa12.13□□□□□ -0.47
HDAC1-208ENST00000482310 FAM156AQ8NDB6 213 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms