RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ARL13AQ5H913 290 aaPredicted RBP10.39□□□□□ -0.75
CCM2-213ENST00000480658 RAET1LQ5VY80 246 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 FBXW10Q5XX13 1052 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 SEM1Q6ZVN7 128 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 SZRD1Q7Z422 152 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 P4HA3Q7Z4N8 544 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 ADGRE4PQ86SQ3 457 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 CHDHQ8NE62 594 aaPredicted RBP10.39□□□□□ -0.75
CCM2-213ENST00000480658 OR56A1Q8NGH5 318 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 GPR151Q8TDV0 419 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 AENQ8WTP8 325 aaKnown RBP10.39□□□□□ -0.75
CCM2-213ENST00000480658 HOXB13Q92826 284 aaPredicted RBP10.39□□□□□ -0.75
CCM2-213ENST00000480658 ZBTB8AQ96BR9 441 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 HOXD1Q9GZZ0 328 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 CLEC4MQ9H2X3 399 aaPredicted RBP10.39□□□□□ -0.75
CCM2-213ENST00000480658 DUSP22Q9NRW4 184 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 NDRG3Q9UGV2 375 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 PACSIN3Q9UKS6 424 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 FIS1Q9Y3D6 152 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 ZNF175Q9Y473 711 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 AP4B1Q9Y6B7 739 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 CREBBPQ92793 2442 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 ADGRG4Q8IZF6 3080 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 UQCRHLA0A096LP55 91 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 SLC22A20A6NK97 555 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 DUXAA6NLW8 204 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 CLCA1A8K7I4 914 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 SCDO00767 359 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 SCAMP2O15127 329 aaKnown RBP10.38□□□□□ -0.75
CCM2-213ENST00000480658 BIRC5O15392 142 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 HCRTR2O43614 444 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 SCO2O43819 266 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 FADS1O60427 444 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 NKX2-2O95096 273 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 ALOX5P09917 674 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 LINC00032P0C843 101 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 HK1P19367 917 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 ATP6V1C1P21283 382 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 ME2P23368 584 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 GABRA3P34903 492 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 GAS1P54826 345 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 TP53BP2Q13625 1128 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 DAZAP2Q15038 168 aaPredicted RBP10.38□□□□□ -0.75
CCM2-213ENST00000480658 RFTN2Q52LD8 501 aaPredicted RBP10.38□□□□□ -0.75
CCM2-213ENST00000480658 XKR7Q5GH72 579 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 CPTPQ5TA50 214 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 Q6ZSR9 355 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 CAMKMTQ7Z624 323 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 MTERF4Q7Z6M4 381 aaKnown RBP10.38□□□□□ -0.75
CCM2-213ENST00000480658 LIX1LQ8IVB5 337 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 COX18Q8N8Q8 333 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 FNDC5Q8NAU1 212 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 RELL2Q8NC24 303 aaPredicted RBP10.38□□□□□ -0.75
CCM2-213ENST00000480658 NAXEQ8NCW5 288 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 SIMC1Q8NDZ2 872 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 NUP43Q8NFH3 380 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 TCP10LQ8TDR4 215 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 ACTRT2Q8TDY3 377 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 OIT3Q8WWZ8 545 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 C1GALT1C1Q96EU7 318 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 TSSK3Q96PN8 268 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 TUBA1CQ9BQE3 449 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 POLDIP3Q9BY77 421 aaKnown RBP10.38□□□□□ -0.75
CCM2-213ENST00000480658 ANKRA2Q9H9E1 313 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 UBQLN4Q9NRR5 601 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 DNAJB12Q9NXW2 375 aaKnown RBP10.38□□□□□ -0.75
CCM2-213ENST00000480658 NOP53Q9NZM5 478 aaKnown RBP10.38□□□□□ -0.75
CCM2-213ENST00000480658 JKAMPQ9P055 326 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 CLCF1Q9UBD9 225 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 ATP6V1HQ9UI12 483 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 FBXL2Q9UKC9 423 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 ACTL7BQ9Y614 415 aa10.38□□□□□ -0.75
CCM2-213ENST00000480658 A0A1W2PQD3 144 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 C7orf72A4D263 438 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 GJE1A6NN92 205 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 A6NNC1 897 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 ALG1L2C9J202 215 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 MSTNO14793 375 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 PIP5K1BO14986 540 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 RGS16O15492 202 aaPredicted RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 CTIFO43310 598 aaKnown RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 NDUFB5O43674 189 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 TNFRSF21O75509 655 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 CTAG2O75638 210 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 UTS2O95399 124 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 ANGPTL1O95841 491 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 AK1P00568 194 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 EPXP11678 715 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 BCKDHAP12694 445 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 TBXA2RP21731 343 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 TACR1P25103 407 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 EIF1P41567 113 aaKnown RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 HCFC1P51610 2035 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 ZNF41P51814 821 aaPredicted RBP10.37□□□□□ -0.75
CCM2-213ENST00000480658 CLDN18P56856 261 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 C21orf58P58505 322 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 CACNA1DQ01668 2161 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 SRYQ05066 204 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 DPY19L1Q2PZI1 675 aa10.37□□□□□ -0.75
CCM2-213ENST00000480658 KRT71Q3SY84 523 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms