RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 WDR45Q9Y484 360 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 PCDHGB7Q9Y5F8 929 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 TNRC6AQ8NDV7 1962 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 LAMA5O15230 3695 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 PDE9AO76083 593 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 OR6B1O95007 311 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 PGM3O95394 542 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 ALPPP05187 535 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 ATP6V1C1P21283 382 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 HLCSP50747 726 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 ELOAQ14241 798 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 TRIM25Q14258 630 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZNF141Q15928 474 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 GPAT3Q53EU6 434 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 CCNJQ5T5M9 372 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 FIGNL1Q6PIW4 674 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 NUP54Q7Z3B4 507 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZAR1Q86SH2 424 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 PATL1Q86TB9 770 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 IFNEQ86WN2 208 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 HPS6Q86YV9 775 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 PRR22Q8IZ63 422 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 RNF148Q8N7C7 305 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 GOLM1Q8NBJ4 401 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 FDCSPQ8NFU4 85 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 OR52E4Q8NGH9 312 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 HGDQ93099 445 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 EFHD2Q96C19 240 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 SGCZQ96LD1 299 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 COL21A1Q96P44 957 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 HOXD1Q9GZZ0 328 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 PIF1Q9H611 641 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 SH2D2AQ9NP31 389 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 FBXO34Q9NWN3 711 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 GMPR2Q9P2T1 348 aaKnown RBP11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 PACSIN3Q9UKS6 424 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 ABCG2Q9UNQ0 655 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 GPC6Q9Y625 555 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 CFAP47Q6ZTR5 3102 aa11.54□□□□□ -0.56
TRAPPC12-218ENST00000479897 MAP1BP46821 2468 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 A0A1W2PQD3 144 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CXCR6O00574 342 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 TP53I11O14683 189 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 HS6ST1O60243 411 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 FCMRO60667 390 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 UGT2B11O75310 529 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 GCM2O75603 506 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 REM1O75628 298 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 PDE5AO76074 875 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 THBS1P07996 1170 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CYP4B1P13584 511 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 TBXA2RP21731 343 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 DCTP40126 519 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CASRP41180 1078 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CCL11P51671 97 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CXADRP78310 365 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 RPP38P78345 283 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CHRNEQ04844 493 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 TRAP1Q12931 704 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 TBR1Q16650 682 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 FLYWCH1Q4VC44 716 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 RPS26P11Q5JNZ5 115 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 LCN8Q6JVE9 175 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 IGFL3Q6UXB1 125 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 TMEM156Q8N614 296 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 FAM156AQ8NDB6 213 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 PAQR8Q8TEZ7 354 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 UTP4Q969X6 686 aaKnown RBP11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 NTNG2Q96CW9 530 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 TMCO6Q96DC7 493 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CLPTM1LQ96KA5 538 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 RNF145Q96MT1 663 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZNF607Q96SK3 696 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 ADOQ96SZ5 270 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 PRORYQ9H606 182 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 GORASP2Q9H8Y8 452 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 MTHFD2LQ9H903 347 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 UBQLN4Q9NRR5 601 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 HPF1Q9NWY4 346 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 STMN3Q9NZ72 180 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 ACTR3BQ9P1U1 418 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 SLC7A8Q9UHI5 535 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZMIZ1Q9ULJ6 1067 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CHCHD2Q9Y6H1 151 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 CNTRLQ7Z7A1 2325 aa11.53□□□□□ -0.56
TRAPPC12-218ENST00000479897 LOC400499M0QZD8 3231 aa11.52□□□□□ -0.56
TRAPPC12-218ENST00000479897 OR5H15A6NDH6 313 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 AGAP5A6NIR3 686 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 ALG1L2C9J202 215 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 ACOT8O14734 319 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 ARPC2O15144 300 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 FADS1O60427 444 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 ICOSLGO75144 302 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 UGT2B17O75795 530 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 UTS2O95399 124 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 TCN1P20061 433 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 KDELR2P33947 212 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 CYB561P49447 251 aa11.52□□□□□ -0.57
TRAPPC12-218ENST00000479897 CRYBA2P53672 197 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms