RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PAFAH2Q99487 392 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 ASCL2Q99929 193 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 CENPOQ9BU64 300 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 TRAF4Q9BUZ4 470 aaPredicted RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 TUBB2BQ9BVA1 445 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 FGFBP2Q9BYJ0 223 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 TM6SF2Q9BZW4 377 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 KCNK15Q9H427 330 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 CUEDC2Q9H467 287 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 THAP9Q9H5L6 903 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 SYTL2Q9HCH5 934 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 KCNJ16Q9NPI9 418 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 INTS10Q9NVR2 710 aaKnown RBP4.03□□□□□ -1.76
VPS50-214ENST00000477935 P4HTMQ9NXG6 502 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 SH3BGRL2Q9UJC5 107 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 PLEKHA6Q9Y2H5 1048 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 ZNF835Q9Y2P0 537 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 CACNA1CQ13936 2221 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 SEC16AO15027 2179 aa4.03□□□□□ -1.76
VPS50-214ENST00000477935 MEGF8Q7Z7M0 2845 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 IGLV3-10A0A075B6K4 115 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 A0A087X002 238 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 A0A1W2PRB8 838 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 E9PI62 339 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 KLF7O75840 302 aaPredicted RBP4.02□□□□□ -1.77
VPS50-214ENST00000477935 PGM3O95394 542 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 CD160O95971 181 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 CAPN1P07384 714 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 HBQ1P09105 142 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 PAEPP09466 180 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 VPREB1P12018 145 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 F3P13726 295 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 FOLR1P15328 257 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 ALOX12P18054 663 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 XRCC1P18887 633 aaPredicted RBP4.02□□□□□ -1.77
VPS50-214ENST00000477935 CEACAM8P31997 349 aaPredicted RBP4.02□□□□□ -1.77
VPS50-214ENST00000477935 OTX2P32243 289 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 GTF2H1P32780 548 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 MMP12P39900 470 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 CASP2P42575 452 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 RGS7P49802 495 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 GFERP55789 205 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 SIRPAP78324 504 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 CDK3Q00526 305 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 GNA12Q03113 381 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 LGALS3BPQ08380 585 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 CUL4AQ13619 759 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 SYCP1Q15431 976 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 C3AR1Q16581 482 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 PYCR3Q53H96 274 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 LRRC73Q5JTD7 316 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 BHLHB9Q6PI77 547 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 C16orf54Q6UWD8 224 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 PAMR1Q6UXH9 720 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 ISLR2Q6UXK2 745 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 TMEM26Q6ZUK4 368 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 NCCRP1Q6ZVX7 275 aaPredicted RBP4.02□□□□□ -1.77
VPS50-214ENST00000477935 KRTAP7-1Q8IUC3 87 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 SHC3Q92529 594 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 HAS2Q92819 552 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 PTERQ96BW5 349 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 TAAR6Q96RI8 345 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 MLPHQ9BV36 600 aaPredicted RBP4.02□□□□□ -1.77
VPS50-214ENST00000477935 TBC1D10AQ9BXI6 508 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 MIS12Q9H081 205 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 DMAC2Q9NW81 257 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 DDIT4Q9NX09 232 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.02□□□□□ -1.77
VPS50-214ENST00000477935 CSAG2Q9Y5P2 127 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 MGAM2Q2M2H8 2515 aa4.02□□□□□ -1.77
VPS50-214ENST00000477935 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.01□□□□□ -1.77
VPS50-214ENST00000477935 NCOA6Q14686 2063 aaPredicted RBP4.01□□□□□ -1.77
VPS50-214ENST00000477935 PIKFYVEQ9Y2I7 2098 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 NYNRINQ9P2P1 1898 aaKnown RBP4.01□□□□□ -1.77
VPS50-214ENST00000477935 IGHV4-61A0A0C4DH41 118 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 TRIM49BA6NDI0 452 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 SERINC4A6NH21 518 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 PRR32B1ATL7 298 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 AVILO75366 819 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 SLCO2B1O94956 709 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 NGFP01138 241 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 IGHV4-59P01825 116 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 GJB2P29033 226 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 RORAP35398 523 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 CAPZBP47756 277 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 TNFSF10P50591 281 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 SNX16P57768 344 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 KCNJ10P78508 379 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 ARG2P78540 354 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 TFF3Q07654 80 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 GTDC1Q4AE62 458 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 FFAR4Q5NUL3 377 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 BRMS1LQ5PSV4 323 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 ZC2HC1BQ5TFG8 222 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 KRT39Q6A163 491 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 TMEM110Q86TL2 294 aa4.01□□□□□ -1.77
VPS50-214ENST00000477935 PPFIBP2Q8ND30 876 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms