RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SOX18P35713 384 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 POLR2IP36954 125 aaKnown RBP7.38□□□□□ -1.23
VMA21-203ENST00000477649 STAT5AP42229 794 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 SMSP52788 366 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 CDH15P55291 814 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 DMWDQ09019 674 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 TSPAN31Q12999 210 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 TARDBPQ13148 414 aaKnown RBP eCLIP7.38□□□□□ -1.23
VMA21-203ENST00000477649 PIN1Q13526 163 aaPredicted RBP7.38□□□□□ -1.23
VMA21-203ENST00000477649 PTGES3Q15185 160 aaKnown RBP7.38□□□□□ -1.23
VMA21-203ENST00000477649 SHBQ15464 509 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 ZNF141Q15928 474 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.38□□□□□ -1.23
VMA21-203ENST00000477649 ZNF528Q3MIS6 628 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 TMEM201Q5SNT2 666 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 RPL13AP3Q6NVV1 102 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 PGBD2Q6P3X8 592 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 PODNL1Q6PEZ8 512 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 ZNF613Q6PF04 617 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 KLHL17Q6TDP4 642 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 CASP12Q6UXS9 341 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 PLEKHM3Q6ZWE6 761 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 DGLUCYQ7Z3D6 616 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 B3GNT8Q7Z7M8 397 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 ENTHD1Q8IYW4 607 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 GALNT15Q8N3T1 639 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 MORN4Q8NDC4 146 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 ZNF540Q8NDQ6 660 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 TMEM52Q8NDY8 209 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 OR4K5Q8NGD3 323 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 OR9Q2Q8NGE9 314 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 OR8J1Q8NGP2 316 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 PIGXQ8TBF5 258 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 FAM81AQ8TBF8 368 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 SLC7A13Q8TCU3 470 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 SAP25Q8TEE9 199 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 RAB2BQ8WUD1 216 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 RORBQ92753 470 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 DIO2Q92813 273 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 OSTF1Q92882 214 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 DAZLQ92904 295 aaKnown RBP7.38□□□□□ -1.23
VMA21-203ENST00000477649 CRELD1Q96HD1 420 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 MPP4Q96JB8 637 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 VSTM2LQ96N03 204 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 SLC46A1Q96NT5 459 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 MCHR1Q99705 422 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 NIPSNAP1Q9BPW8 284 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 ZNF559Q9BR84 538 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 TRIM2Q9C040 744 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 FOLH1BQ9HBA9 442 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 ZNF304Q9HCX3 659 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 HCN3Q9P1Z3 774 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 TMEM5Q9Y2B1 443 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 KCNE3Q9Y6H6 103 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 C5orf42Q9H799 3197 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 TMEM131Q92545 1883 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 MYOCOSA0A1B0GUC4 107 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 TRIM64BA6NI03 449 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 OR6C76A6NM76 312 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 CLCA1A8K7I4 914 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ZNF99A8MXY4 864 aaPredicted RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 POLR1CO15160 346 aaPredicted RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 FCMRO60667 390 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 SEMA7AO75326 666 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 WBP4O75554 376 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 KCNK2O95069 426 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 EPPINO95925 133 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ONECUT2O95948 504 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 IFNA16P05015 189 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 GABRB1P18505 474 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 TNNI3P19429 210 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 DRD5P21918 477 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 FBLP22087 321 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 FPR3P25089 353 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 RORAP35398 523 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ADH7P40394 386 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 RBM34P42696 430 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 GSSP48637 474 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 IDH2P48735 452 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 EMDP50402 254 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ST13P50502 369 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 ATP12AP54707 1039 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 PSG6Q00889 435 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 BNC1Q01954 994 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ID2Q02363 134 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 BNIP3Q12983 259 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 DYNC1I2Q13409 638 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 TRA2AQ13595 282 aaKnown RBP eCLIP7.37□□□□□ -1.23
VMA21-203ENST00000477649 RAB39AQ14964 217 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ELAVL1Q15717 326 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 TBCEQ15813 527 aaPredicted RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 NPTX1Q15818 432 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 OCLNQ16625 522 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 FLYWCH1Q4VC44 716 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 RNLSQ5VYX0 342 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ANKRD34AQ69YU3 496 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 C12orf73Q69YU5 71 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 LAIR2Q6ISS4 152 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 RHBDD2Q6NTF9 364 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ZNF730Q6ZMV8 503 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms