RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 FAM3CQ92520 227 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 THRSPQ92748 146 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 ELL3Q9HB65 397 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-220ENST00000477528 SLC6A13Q9NSD5 602 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 CPNE7Q9UBL6 633 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 KCNE1BA0A087WTH5 132 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 A0A1W2PRG6 482 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 RDH16O75452 317 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 GPR75O95800 540 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 MYOGP15173 224 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 ENDOUP21128 410 aaKnown RBP13.74□□□□□ -0.21
HDAC6-220ENST00000477528 CBLP22681 906 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 GNALP38405 381 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 HNRNPFP52597 415 aaKnown RBP13.74□□□□□ -0.21
HDAC6-220ENST00000477528 COL9A2Q14055 689 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-220ENST00000477528 DUSP7Q16829 419 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 TBRG1Q3YBR2 411 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 HSD17B12Q53GQ0 312 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 CCDC80Q76M96 950 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 SNX29P2Q8IUI4 249 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 C1QTNF2Q9BXJ5 285 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 LTB4R2Q9NPC1 389 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 ACER3Q9NUN7 267 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 NAALAD2Q9Y3Q0 740 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 MYO7AQ13402 2215 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 INMT-MINDY4F8WBC2 141 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 HCRTR2O43614 444 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 ACVR1BP36896 505 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 CSRP3P50461 194 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 MRPS21P82921 87 aaKnown RBP13.74□□□□□ -0.21
HDAC6-220ENST00000477528 ADPRMQ3LIE5 342 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 C18orf63Q68DL7 685 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 SLC48A1Q6P1K1 146 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 XKRXQ6PP77 449 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 ATCAYQ86WG3 371 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 SLC37A3Q8NCC5 494 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 OR8H1Q8NGG4 311 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 THAP4Q8WY91 577 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 RELTQ969Z4 430 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 SERINC1Q9NRX5 453 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 KLHL18O94889 574 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 LDOC1O95751 146 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-220ENST00000477528 PDE7AQ13946 482 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 GRM7Q14831 915 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 PGGHGQ32M88 737 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 ATG4BQ9Y4P1 393 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 CPED1A4D0V7 1026 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 LRIT2A6NDA9 550 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 LRRN3E7EW58 273 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 ARHGAP33O14559 1287 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 TLX3O43711 291 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-220ENST00000477528 PROS1P07225 676 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 GKN3PP0CG01 181 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 BMP4P12644 408 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 YPEL5P62699 121 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 PRKCDQ05655 676 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 SLX4IPQ5VYV7 408 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 CDH24Q86UP0 819 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 TNFAIP8L1Q8WVP5 186 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 ALG8Q9BVK2 526 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 LRRN3Q9H3W5 708 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 EVA1AQ9H8M9 152 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 C1GALT1Q9NS00 363 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 POT1Q9NUX5 634 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 SERTM1A2A2V5 107 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 SGK494L7N484 410 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 ZNF217O75362 1048 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 OR2B3O76000 313 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 IFNA6P05013 189 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 GP2P55259 537 aaKnown RBP13.73□□□□□ -0.21
HDAC6-220ENST00000477528 UBE2UQ5VVX9 321 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 Q6ZNX1 250 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 Q8N9G6 341 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-220ENST00000477528 ALOXE3Q9BYJ1 711 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 HOXD1Q9GZZ0 328 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 CA5BQ9Y2D0 317 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 CROCCQ5TZA2 2017 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 DOCK3Q8IZD9 2030 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 PRKRAO75569 313 aaKnown RBP13.73□□□□□ -0.21
HDAC6-220ENST00000477528 NDUFB2O95178 105 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 WDR45BQ5MNZ6 344 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 FAHD1Q6P587 224 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 SYCE2Q6PIF2 218 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 CAMKMTQ7Z624 323 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 KRT77Q7Z794 578 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 OR4K13Q8NH42 304 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 DAZLQ92904 295 aaKnown RBP13.73□□□□□ -0.21
HDAC6-220ENST00000477528 S100A16Q96FQ6 103 aaKnown RBP13.73□□□□□ -0.21
HDAC6-220ENST00000477528 GPER1Q99527 375 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 OR52D1Q9H346 318 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 UPB1Q9UBR1 384 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 A8MVJ9 347 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 PPP1R3DO95685 299 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 PVRP15151 417 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 CCNJQ5T5M9 372 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 TMEM64Q6YI46 380 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 PARP16Q8N5Y8 322 aa13.73□□□□□ -0.21
HDAC6-220ENST00000477528 OR6C4Q8NGE1 309 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms