RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 IFNGR2P38484 337 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 MAPK9P45984 424 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 RNF144AP50876 292 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 CDH11P55287 796 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 ERVK-21P61565 698 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 FOXD4Q12950 439 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 MPEG1Q2M385 716 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 TUSC1Q2TAM9 212 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 MPPE1Q53F39 396 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 B3GNTL1Q67FW5 361 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 GAREM2Q75VX8 874 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 HS6ST3Q8IZP7 471 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 SAMD12Q8N8I0 201 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 ARL14EPQ8N8R7 260 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 PCNPQ8WW12 178 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 NR4A3Q92570 626 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 DACT3Q96B18 629 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 TMEM19Q96HH6 336 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 FNDC11Q9BVV2 318 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 BRD9Q9H8M2 597 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 PRM3Q9NNZ6 103 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 BRD7Q9NPI1 651 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 MED17Q9NVC6 651 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 ING1Q9UK53 422 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 A4GNTQ9UNA3 340 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 TMEM5Q9Y2B1 443 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 FCF1Q9Y324 198 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 DENND4CQ5VZ89 1909 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 NUP210Q8TEM1 1887 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 H3BUI4 141 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 SEMA7AO75326 666 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 PEX14O75381 377 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 CKMP06732 381 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 FGF2P09038 288 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 OR12D1P0DN82 309 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 GIFP27352 417 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 CALCRP30988 508 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 THBS2P35442 1172 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 SGSHP51688 502 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 BLVRAP53004 296 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 SMAD3P84022 425 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 RPL6Q02878 288 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 RPS26P11Q5JNZ5 115 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 CDC73Q6P1J9 531 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 NLRC3Q7RTR2 1065 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 VRK3Q8IV63 474 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 DCAF4L2Q8NA75 395 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 GPR26Q8NDV2 337 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 SLC38A5Q8WUX1 472 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 SPATA5L1Q9BVQ7 753 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 PTGFRNQ9P2B2 879 aa14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 PPIEQ9UNP9 301 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 ZFR2Q9UPR6 939 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-205ENST00000477264 A0A1W2PRU2 124 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 ABCD4O14678 606 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 RNF13O43567 381 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 GSTZ1O43708 216 aaPredicted RBP14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 FGF19O95750 216 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 PROS1P07225 676 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 SLC6A11P48066 632 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 ZNF169Q14929 603 aaPredicted RBP14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 STK11Q15831 433 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 ADGRF1Q5T601 910 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 FAM69AQ5T7M9 428 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 VASNQ6EMK4 673 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 AGTRAPQ6RW13 159 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 FAM83HQ6ZRV2 1179 aaPredicted RBP14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 RASSF6Q6ZTQ3 369 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 ZER1Q7Z7L7 766 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 NAXDQ8IW45 347 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 CLRN3Q8NCR9 226 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 FAM71CQ8NEG0 241 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 OR56A3Q8NH54 315 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 GNPDA2Q8TDQ7 276 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 SCARB1Q8WTV0 552 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 YIPF5Q969M3 257 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 SFXN2Q96NB2 322 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 FN3KQ9H479 309 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 SLC9A8Q9Y2E8 581 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 DOCK6Q96HP0 2047 aa14.31□□□□□ -0.12
CLSTN1-205ENST00000477264 C2orf92A0A1B0GVN3 265 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 A0A1B0GW55 424 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 LRRN3E7EW58 273 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 L7N2F9 121 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 AIPO00170 330 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 APOL3O95236 402 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 GIPP09681 153 aaPredicted RBP14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 DUX4L2P0CJ85 424 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 DUX4L3P0CJ86 424 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 DUX4L4P0CJ87 422 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 DUX4L5P0CJ88 424 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 DUX4L6P0CJ89 424 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 DUX4L7P0CJ90 424 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 CD79BP40259 229 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 ZP1P60852 638 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 CNTN1Q12860 1018 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 METTL11BQ5VVY1 283 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 RETSATQ6NUM9 610 aa14.3□□□□□ -0.12
CLSTN1-205ENST00000477264 SMARCD3Q6STE5 483 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms