RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 MLST8Q9BVC4 326 aa6.15□□□□□ -1.42
LRCH3-215ENST00000476664 MRPL37Q9BZE1 423 aaKnown RBP6.15□□□□□ -1.42
LRCH3-215ENST00000476664 GLT8D2Q9H1C3 349 aa6.15□□□□□ -1.42
LRCH3-215ENST00000476664 DHX33Q9H6R0 707 aaKnown RBP6.15□□□□□ -1.42
LRCH3-215ENST00000476664 AGPAT3Q9NRZ7 376 aa6.15□□□□□ -1.42
LRCH3-215ENST00000476664 UFSP2Q9NUQ7 469 aa6.15□□□□□ -1.42
LRCH3-215ENST00000476664 ZNF346Q9UL40 294 aaKnown RBP6.15□□□□□ -1.42
LRCH3-215ENST00000476664 TSC2P49815 1807 aa6.15□□□□□ -1.43
LRCH3-215ENST00000476664 LCTP09848 1927 aa6.15□□□□□ -1.43
LRCH3-215ENST00000476664 CACNA1EQ15878 2313 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 TEX13DA0A0J9YY54 714 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-215ENST00000476664 LOC100506127A0A0U1RQW1 187 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 SNTNA6NMZ2 147 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 HIDE1A8MVS5 230 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 AKR7A2O43488 359 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 CHMP2AO43633 222 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 TPST2O60704 377 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 RFPL2O75678 378 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 EML2O95834 649 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 TSPAN15O95858 294 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 FCGR1AP12314 374 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 UQCRBP14927 111 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 TPSB2P20231 275 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 MSH3P20585 1137 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 NT5EP21589 574 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 GPD1P21695 349 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 ANXA13P27216 316 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 CSTF2P33240 577 aaKnown RBP eCLIP6.14□□□□□ -1.437e-8■■■■□ 26.1
LRCH3-215ENST00000476664 CYLC1P35663 651 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-215ENST00000476664 MAGEA9P43362 315 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 STARP49675 285 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 MERTKQ12866 999 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 ITGA9Q13797 1035 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 GANABQ14697 944 aaKnown RBP6.14□□□□□ -1.43
LRCH3-215ENST00000476664 MEF2DQ14814 521 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 OR1C1Q15619 314 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 TPSAB1Q15661 275 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 INPP5JQ15735 1006 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-215ENST00000476664 CLPPQ16740 277 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-215ENST00000476664 PARP6Q2NL67 630 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 KRTAP21-3Q3LHN1 58 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 Q3ZCU0 254 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 ACSF3Q4G176 576 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-215ENST00000476664 ASPRV1Q53RT3 343 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 FAM76BQ5HYJ3 339 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 LIN9Q5TKA1 542 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 CCNI2Q6ZMN8 369 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-215ENST00000476664 AMIGO2Q86SJ2 522 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 GLCCI1Q86VQ1 547 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 GPBP1Q86WP2 473 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 CRYBG2Q8N1P7 616 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 TRIML2Q8N7C3 387 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 CCDC197Q8NCU1 140 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 OR4C5Q8NGB2 326 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 OR4C15Q8NGM1 316 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 M1APQ8TC57 530 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 BPIFA2Q96DR5 249 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 ACCSQ96QU6 501 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 CCM2Q9BSQ5 444 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 SLC52A3Q9NQ40 469 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 SLC38A7Q9NVC3 462 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 GCNT4Q9P109 453 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 SLC17A6Q9P2U8 582 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 STUB1Q9UNE7 303 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 SLC9A8Q9Y2E8 581 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 PLXNB3Q9ULL4 1909 aa6.14□□□□□ -1.43
LRCH3-215ENST00000476664 USP9YO00507 2555 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 CENPEQ02224 2701 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 COL5A1P20908 1838 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 MYH15Q9Y2K3 1946 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 MTMR11A4FU01 709 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 ZNF732B4DXR9 585 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 PRR23D1E9PI22 279 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 K7ERQ8 282 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 CCL24O00175 119 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 FOXE1O00358 373 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 ABCD4O14678 606 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 TRDMT1O14717 391 aaKnown RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 KRT86O43790 486 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 N4BP1O75113 896 aaKnown RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 GAGE7O76087 117 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 SOX30O94993 753 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 TSPAN12O95859 305 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 TFAP2AP05549 437 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 CRYGCP07315 174 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 FAM106CPP0CH98 169 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 PRR23D2P0DMB1 279 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 CTSAP10619 480 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 CSRP1P21291 193 aaKnown RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 ACKR3P25106 362 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 U2AF2P26368 475 aaKnown RBP eCLIP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 RBMS1P29558 406 aaKnown RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 CCT3P49368 545 aaKnown RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 RARRES1P49788 294 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 CSRP3P50461 194 aa6.13□□□□□ -1.43
LRCH3-215ENST00000476664 CRYBB1P53674 252 aaPredicted RBP6.13□□□□□ -1.43
LRCH3-215ENST00000476664 C21orf59P57076 290 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms