RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 MEIOBQ8N635 442 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 CNEP1R1Q8N9A8 125 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 FNDC9Q8TBE3 224 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 IFT81Q8WYA0 676 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
MRPL55-228ENST00000476267 C1GALT1C1Q96EU7 318 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 ZNF845Q96IR2 970 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-228ENST00000476267 LMF2Q9BU23 707 aaKnown RBP11.8□□□□□ -0.52
MRPL55-228ENST00000476267 GLIPR2Q9H4G4 154 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 MYNNQ9NPC7 610 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 GIMAP4Q9NUV9 329 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 EMCNQ9ULC0 261 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 GRID1Q9ULK0 1009 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 OR10H1Q9Y4A9 318 aa11.8□□□□□ -0.52
MRPL55-228ENST00000476267 EXOC1LA0A1B0GW35 172 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 NCBP2P52298 156 aaKnown RBP eCLIP11.79□□□□□ -0.52
MRPL55-228ENST00000476267 PON3Q15166 354 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 ACKR1Q16570 336 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 GLYR1Q49A26 553 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-228ENST00000476267 TRIM46Q7Z4K8 759 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 SLC22A9Q8IVM8 553 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 ZNF610Q8N9Z0 462 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 OR5M1Q8NGP8 315 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 PIGTQ969N2 578 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 ELP4Q96EB1 424 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 PIK3IP1Q96FE7 263 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 AMDHD1Q96NU7 426 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 BBS4Q96RK4 519 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 PIGQQ9BRB3 760 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 PINK1Q9BXM7 581 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 ZNF226Q9NYT6 803 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 SENP1Q9P0U3 644 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 NFU1Q9UMS0 254 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 CCL27Q9Y4X3 112 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 NAV3Q8IVL0 2385 aa11.79□□□□□ -0.52
MRPL55-228ENST00000476267 G3V2L1 256 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 H3BML4 177 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 SEC14L5O43304 696 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 ARHGEF9O43307 516 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 SMPD2O60906 423 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 URI1O94763 535 aaPredicted RBP11.78□□□□□ -0.52
MRPL55-228ENST00000476267 AQP8O94778 261 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 LY6G6DO95868 133 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 IGKV1D-16P01601 117 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 THBDP07204 575 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 GSTA1P08263 222 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 POU2F1P14859 743 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 EEFSECP57772 596 aaKnown RBP11.78□□□□□ -0.52
MRPL55-228ENST00000476267 SIRPAP78324 504 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 PRR5P85299 388 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 BTKQ06187 659 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 C2orf80Q0P641 193 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 STX5Q13190 355 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 FGFBP1Q14512 234 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 KIAA0040Q15053 153 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 DECR1Q16698 335 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 SH2D4BQ5SQS7 431 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 LGSNQ5TDP6 509 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 FAM214BQ7L5A3 538 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 ZNF550Q7Z398 422 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 MARCH3Q86UD3 253 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 ACMSDQ8TDX5 336 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 DUSP19Q8WTR2 217 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 CAVIN3Q969G5 261 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 ADGRG7Q96K78 797 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 MED18Q9BUE0 208 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 TNFRSF12AQ9NP84 129 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 SDHAF3Q9NRP4 125 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 WBP11Q9Y2W2 641 aaKnown RBP11.78□□□□□ -0.52
MRPL55-228ENST00000476267 AP4B1Q9Y6B7 739 aa11.78□□□□□ -0.52
MRPL55-228ENST00000476267 FAM171A2A8MVW0 826 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 SHISA8B8ZZ34 492 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 NPIPB8E9PQR5 432 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 C16orf97H3BN30 126 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 H7C1Q1 480 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 RIPK2O43353 540 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 RSL1D1O76021 490 aaKnown RBP11.77□□□□□ -0.53
MRPL55-228ENST00000476267 ANGPTL1O95841 491 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 PAX1P15863 534 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 FPR1P21462 350 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 PSMA4P25789 261 aaKnown RBP11.77□□□□□ -0.53
MRPL55-228ENST00000476267 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.77□□□□□ -0.53
MRPL55-228ENST00000476267 CTU2Q2VPK5 515 aaKnown RBP11.77□□□□□ -0.53
MRPL55-228ENST00000476267 GLE1Q53GS7 698 aaKnown RBP11.77□□□□□ -0.53
MRPL55-228ENST00000476267 C20orf204Q6ZNR8 217 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 SH2D5Q6ZV89 423 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 IKBIPQ70UQ0 350 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 CHMP1BQ7LBR1 199 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 PRIMA1Q86XR5 153 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 FAM76AQ8TAV0 307 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 EGLN2Q96KS0 407 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 C16orf45Q96MC5 204 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-228ENST00000476267 Q96MF0 132 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 CCL19Q99731 98 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 NPAS1Q99742 590 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 SLC39A3Q9BRY0 314 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 TXLNGYQ9BZA5 131 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 PTGES2Q9H7Z7 377 aa11.77□□□□□ -0.53
MRPL55-228ENST00000476267 ZNF395Q9H8N7 513 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms