RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	CUBN	O60494	3623 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	IGLV7-46	A0A075B6I9	117 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	IGHV1OR21-1	A0A087WYE8	117 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	HYKK	A2RU49	373 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	XPO1	O14980	1071 aa	Known RBP	4	□□□□□ -1.77
PRKD3-208	ENST00000475912	HLA-DRA	P01903	254 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	RPN1	P04843	607 aa	Known RBP	4	□□□□□ -1.77
PRKD3-208	ENST00000475912	CD99	P14209	185 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	LONP1	P36776	959 aa	Known RBP	4	□□□□□ -1.77
PRKD3-208	ENST00000475912	CCL11	P51671	97 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	AP3M2	P53677	418 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	DSCR10	P59022	87 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	SCARB2	Q14108	478 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	IRF4	Q15306	451 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	HYAL4	Q2M3T9	481 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	VWC2	Q2TAL6	325 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	KLHL26	Q53HC5	615 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	C1QTNF12	Q5T7M4	302 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	RNASEH2B	Q5TBB1	312 aa	Known RBP	4	□□□□□ -1.77
PRKD3-208	ENST00000475912	C22orf39	Q6P5X5	142 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZNF613	Q6PF04	617 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	SUSD1	Q6UWL2	747 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	ENPP7	Q6UWV6	458 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	TAF8	Q7Z7C8	310 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	NELFCD	Q8IXH7	590 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	SIX6OS1	Q8N1H7	587 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	PAPD5	Q8NDF8	572 aa	Known RBP	4	□□□□□ -1.77
PRKD3-208	ENST00000475912	EXD1	Q8NHP7	514 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	UBA3	Q8TBC4	463 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	PATE1	Q8WXA2	126 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	OR1E3	Q8WZA6	343 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	TAF4B	Q92750	862 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	PNPLA2	Q96AD5	504 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	CCDC114	Q96M63	670 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	RUFY1	Q96T51	708 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	RBM4B	Q9BQ04	359 aa	Known RBP	4	□□□□□ -1.77
PRKD3-208	ENST00000475912	DDX50	Q9BQ39	737 aa	Known RBP	4	□□□□□ -1.77
PRKD3-208	ENST00000475912	LLPH	Q9BRT6	129 aa	Known RBP	4	□□□□□ -1.77
PRKD3-208	ENST00000475912	NUDT9	Q9BW91	350 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	P2RY12	Q9H244	342 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	DPEP2	Q9H4A9	486 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	CYP3A43	Q9HB55	503 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	SLC24A2	Q9UI40	661 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZDHHC2	Q9UIJ5	367 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	TSPAN16	Q9UKR8	245 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	OR1A2	Q9Y585	309 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	ATR	Q13535	2644 aa		4	□□□□□ -1.77
PRKD3-208	ENST00000475912	NSD1	Q96L73	2696 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	LRP4	O75096	1905 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	COL6A5	A8TX70	2615 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ARGFX	A6NJG6	315 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912		A8MU76	341 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912		F5H5T6	163 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	TRIM77	I1YAP6	450 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	E2F3	O00716	465 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	XRCC3	O43542	346 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	DPM1	O60762	260 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	LRCH4	O75427	683 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	CEACAM4	O75871	244 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	DUS4L	O95620	317 aa	Known RBP	3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	FGF1	P05230	155 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	GPI	P06744	558 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	DANCR	P0C864	163 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	TRIM49	P0CI25	452 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	TRIM49C	P0CI26	452 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	COX6B1	P14854	86 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	CD1E	P15812	388 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ERCC2	P18074	760 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ACHE	P22303	614 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	PCGF2	P35227	344 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	RGS7	P49802	495 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	CCNH	P51946	323 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	BST2	Q10589	180 aa	Known RBP	3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	HSPB3	Q12988	150 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	EIF4EBP2	Q13542	120 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	PTPRCAP	Q14761	206 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	CHRNA6	Q15825	494 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	CLPP	Q16740	277 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	KLHL40	Q2TBA0	621 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	WSCD2	Q2TBF2	565 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	SYPL2	Q5VXT5	272 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	PMF1	Q6P1K2	205 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	TRAT1	Q6PIZ9	186 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ARHGAP22	Q7Z5H3	698 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ZSCAN30	Q86W11	494 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	C12orf56	Q8IXR9	622 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	IQCK	Q8N0W5	287 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	LYG1	Q8N1E2	194 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	RAB42	Q8N4Z0	105 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	FAM184A	Q8NB25	1140 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	CAMKV	Q8NCB2	501 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	PPFIBP2	Q8ND30	876 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ST6GALNAC3	Q8NDV1	305 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	FDCSP	Q8NFU4	85 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	OR5M8	Q8NGP6	311 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	OR13J1	Q8NGT2	312 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	OR6K2	Q8NGY2	324 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	FGFBP3	Q8TAT2	258 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	UBE2Q2	Q8WVN8	375 aa		3.99	□□□□□ -1.77
PRKD3-208	ENST00000475912	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms