RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 ALDH16A1Q8IZ83 802 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 OR1L3Q8NH93 324 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 FAR1Q8WVX9 515 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 CCDC74AQ96AQ1 378 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 CNDP2Q96KP4 475 aaKnown RBP17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 GPA33Q99795 319 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 DHCR7Q9UBM7 475 aaKnown RBP17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 WARS2Q9UGM6 360 aaKnown RBP17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 HEMK1Q9Y5R4 338 aaPredicted RBP17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 CABIN1Q9Y6J0 2220 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 ZNF749O43361 778 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 BRINP1O60477 761 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 KCNK2O95069 426 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 NTN1O95631 604 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 FADS2O95864 444 aaKnown RBP17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 FOLR1P15328 257 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 RPS4Y1P22090 263 aaKnown RBP17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 EMP3P54852 163 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 MRPL2Q5T653 305 aaKnown RBP17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 C1orf94Q6P1W5 598 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 ZNF730Q6ZMV8 503 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 PRSS48Q7RTY5 328 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 NUDT22Q9BRQ3 303 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 COPS4Q9BT78 406 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 NECTIN3Q9NQS3 549 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 PLCXD1Q9NUJ7 323 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 NLGN3Q9NZ94 848 aa17.01■□□□□ 0.31
SEC61A2-213ENST00000475268 ASXL3Q9C0F0 2248 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 MN1Q10571 1320 aaPredicted RBP17■□□□□ 0.31
SEC61A2-213ENST00000475268 ZNF99A8MXY4 864 aaPredicted RBP17■□□□□ 0.31
SEC61A2-213ENST00000475268 H3BMQ9 156 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 LAMTOR5O43504 91 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 NID1P14543 1247 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 EPHA8P29322 1005 aaPredicted RBP17■□□□□ 0.31
SEC61A2-213ENST00000475268 COX10Q12887 443 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 NR1D2Q14995 579 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 ZAR1Q86SH2 424 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 ERI1Q8IV48 349 aaKnown RBP17■□□□□ 0.31
SEC61A2-213ENST00000475268 D2HGDHQ8N465 521 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 OR4N2Q8NGD1 307 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 RORBQ92753 470 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 HOXB13Q92826 284 aaPredicted RBP17■□□□□ 0.31
SEC61A2-213ENST00000475268 COG8Q96MW5 612 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 LMF2Q9BU23 707 aaKnown RBP17■□□□□ 0.31
SEC61A2-213ENST00000475268 PSORS1C1Q9UIG5 152 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 PILRBQ9UKJ0 227 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 ERVK-19Q9WJR5 959 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 DTX4Q9Y2E6 619 aa17■□□□□ 0.31
SEC61A2-213ENST00000475268 NOL3O60936 208 aaKnown RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 TDGF1P13385 188 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 MASP1P48740 699 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 GP2P55259 537 aaKnown RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 SH3BGRP55822 239 aaPredicted RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 CSTF1Q05048 431 aaKnown RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 FLYWCH1Q4VC44 716 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 WDR74Q6RFH5 385 aaPredicted RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 CD300LDQ6UXZ3 194 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 RRM2BQ7LG56 351 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 PRICKLE2Q7Z3G6 844 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 GDF7Q7Z4P5 450 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 GPR135Q8IZ08 494 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 PIGKQ92643 395 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 SLC41A3Q96GZ6 507 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 VSTM2LQ96N03 204 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 IL4I1Q96RQ9 567 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 DOK1Q99704 481 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 PRMT8Q9NR22 394 aaPredicted RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 CLCA1A8K7I4 914 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 HYAL3O43820 417 aaPredicted RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 MPZL2O60487 215 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 ATE1O95260 518 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 THY1P04216 161 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 TP53P04637 393 aaPredicted RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 GKN3PP0CG01 181 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 IFNGR2P38484 337 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 ZNF136P52737 540 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 TEKQ02763 1124 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 MFSD4BQ5TF39 518 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 SLX4IPQ5VYV7 408 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 RANBP3LQ86VV4 465 aaPredicted RBP16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 NKAIN4Q8IVV8 208 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 SVOPQ8N4V2 548 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 GAB3Q8WWW8 586 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 GGHQ92820 318 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 SLC41A2Q96JW4 573 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 PTCHD1Q96NR3 888 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 GPR83Q9NYM4 423 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 SUSD2Q9UGT4 822 aa16.99■□□□□ 0.31
SEC61A2-213ENST00000475268 CPED1A4D0V7 1026 aa16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 CDHR4A6H8M9 788 aa16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 MRPS14O60783 128 aaKnown RBP16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 PRAMEF2O60811 474 aa16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 SOX30O94993 753 aa16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 OR5F1O95221 314 aa16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 PRG2P13727 222 aa16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 PLK5Q496M5 336 aa16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 PRPF38BQ5VTL8 546 aaKnown RBP16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 CASP12Q6UXS9 341 aa16.98■□□□□ 0.31
SEC61A2-213ENST00000475268 IQCF1Q8N6M8 205 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms