RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 PEX2P28328 305 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 EIF2S3P41091 472 aaKnown RBP18.84■□□□□ 0.61
CDHR3-210ENST00000474330 FAM69BQ5VUD6 431 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 APCDD1LQ8NCL9 501 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 APOBEC4Q8WW27 367 aaKnown RBP18.84■□□□□ 0.61
CDHR3-210ENST00000474330 PROX1Q92786 737 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 FGF11Q92914 225 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 LCORQ96JN0 433 aaPredicted RBP18.84■□□□□ 0.61
CDHR3-210ENST00000474330 PINK1Q9BXM7 581 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 TRIM45Q9H8W5 580 aaPredicted RBP18.84■□□□□ 0.61
CDHR3-210ENST00000474330 THSD1Q9NS62 852 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 IFT52Q9Y366 437 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 SH3GLB1Q9Y371 365 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 OR10H1Q9Y4A9 318 aa18.84■□□□□ 0.61
CDHR3-210ENST00000474330 PRAMEF25A6NGN4 478 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 FRG2CA6NGY1 282 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 AGAP5A6NIR3 686 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 KIAA0513O60268 411 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 OR1E2P47887 323 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 KCNC4Q03721 635 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 GPR68Q15743 365 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 CYP27C1Q4G0S4 372 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 ZNF311Q5JNZ3 666 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 SLC29A4Q7RTT9 530 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 PEX5LQ8IYB4 626 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 NLGN4XQ8N0W4 816 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 NLGN4YQ8NFZ3 816 aaPredicted RBP18.83■□□□□ 0.61
CDHR3-210ENST00000474330 OR52P1PQ8NH57 321 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 SNIP1Q8TAD8 396 aaKnown RBP18.83■□□□□ 0.61
CDHR3-210ENST00000474330 C8orf44Q96CB5 159 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 G6PC3Q9BUM1 346 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 FAM117AQ9C073 453 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 VCX3BQ9H321 246 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 NTN4Q9HB63 628 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 PRDM4Q9UKN5 801 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 TCFL5Q9UL49 500 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 ABCG2Q9UNQ0 655 aa18.83■□□□□ 0.61
CDHR3-210ENST00000474330 FARSAQ9Y285 508 aaKnown RBP18.83■□□□□ 0.61
CDHR3-210ENST00000474330 hCG_2039718K7EN88 272 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 PEX1O43933 1283 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 SEC24DO94855 1032 aaPredicted RBP18.82■□□□□ 0.6
CDHR3-210ENST00000474330 IGKV1D-16P01601 117 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 THBS1P07996 1170 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 TNFRSF1BP20333 461 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 RPS4Y1P22090 263 aaKnown RBP18.82■□□□□ 0.6
CDHR3-210ENST00000474330 MMP11P24347 488 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 PRKAR1BP31321 381 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 SLC26A5P58743 744 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 HLA-DQA1Q5Y7H0 255 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 DHRS4L2Q6PKH6 230 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 TSEN54Q7Z6J9 526 aaKnown RBP18.82■□□□□ 0.6
CDHR3-210ENST00000474330 BCORP1Q8N888 145 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 C17orf47Q8NEP4 570 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 VMP1Q96GC9 406 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 WWTR1Q9GZV5 400 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 NXF5Q9H1B4 397 aaKnown RBP18.82■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF223Q9UK11 482 aaPredicted RBP18.82■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF232Q9UNY5 417 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 SYT5O00445 386 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 DPM1O60762 260 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 LGI1O95970 557 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 ITGA2P17301 1181 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 ATP6V1C1P21283 382 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 RPS15P62841 145 aaKnown RBP18.82■□□□□ 0.6
CDHR3-210ENST00000474330 NNATQ16517 81 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.82■□□□□ 0.6
CDHR3-210ENST00000474330 LRRC36Q1X8D7 754 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 HMGN2P46Q86SG4 172 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 VRK2Q86Y07 508 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 ICA1LQ8NDH6 482 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 CATSPER1Q8NEC5 780 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 EME1Q96AY2 570 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 GAL3ST4Q96RP7 486 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 KLHL4Q9C0H6 718 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 CACYBPQ9HB71 228 aaKnown RBP18.82■□□□□ 0.6
CDHR3-210ENST00000474330 NDUFAF4Q9P032 175 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 HS3ST3B1Q9Y662 390 aa18.82■□□□□ 0.6
CDHR3-210ENST00000474330 MGAQ8IWI9 3026 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 A0A1W2PQ72 361 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.81■□□□□ 0.6
CDHR3-210ENST00000474330 GNGT2O14610 69 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 TO15178 435 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 RAD1O60671 282 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 UGT2B17O75795 530 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 EPPINO95925 133 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 DBIP07108 87 aaKnown RBP18.81■□□□□ 0.6
CDHR3-210ENST00000474330 STAT5AP42229 794 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 RNF4P78317 190 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 LARS2Q15031 903 aaKnown RBP18.81■□□□□ 0.6
CDHR3-210ENST00000474330 PCOLCEQ15113 449 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 OR2T5Q6IEZ7 315 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 HSDL2Q6YN16 418 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 ZAR1Q86SH2 424 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF441Q8N8Z8 693 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 OR2T29Q8NH02 315 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 OR8K3Q8NH51 312 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 VPS50Q96JG6 964 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF300Q96RE9 604 aaPredicted RBP18.81■□□□□ 0.6
CDHR3-210ENST00000474330 ZNF347Q96SE7 839 aa18.81■□□□□ 0.6
CDHR3-210ENST00000474330 AMBRA1Q9C0C7 1298 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms