RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 STK19P49842 368 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 VCPP55072 806 aaKnown RBP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 IRX1P78414 480 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 IL24Q13007 206 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 CALCOCO2Q13137 446 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 CHIT1Q13231 466 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 ITPK1Q13572 414 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 TMEM187Q14656 261 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 WDR43Q15061 677 aaKnown RBP eCLIP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 NECTIN1Q15223 517 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 CCDC152Q4G0S7 254 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 RUSC1-AS1Q66K80 236 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 PRR5LQ6MZQ0 368 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 FAAP20Q6NZ36 180 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 KLHDC8BQ8IXV7 354 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 LRRC15Q8TF66 581 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 OMDQ99983 421 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 HSD17B14Q9BPX1 270 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 ZSCAN5AQ9BUG6 496 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 TRIM9Q9C026 710 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 RNF41Q9H4P4 317 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 ESM1Q9NQ30 184 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 THEGQ9P2T0 379 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 MBD2Q9UBB5 411 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 HPCAL4Q9UM19 191 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 RABL2BQ9UNT1 228 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 EXOSC1Q9Y3B2 195 aaKnown RBP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 CPQQ9Y646 472 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 MAD1L1Q9Y6D9 718 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 PLXNC1O60486 1568 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 SAMD9Q5K651 1589 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 MBD5Q9P267 1494 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 CASKIN1Q8WXD9 1431 aa3.53□□□□□ -1.85
BRCA1-212ENST00000473961 CCDC171Q6TFL3 1326 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 A0A1W2PNV4 684 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 IFITM10A6NMD0 228 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 CASKO14936 926 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 LINC01565O15544 149 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 IDH3BO43837 385 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 NEMFO60524 1076 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 STX11O75558 287 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 SCGNO76038 276 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 UFL1O94874 794 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 SORBS2O94875 1100 aaKnown RBP3.52□□□□□ -1.85
BRCA1-212ENST00000473961 SMC2O95347 1197 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 PDHBP11177 359 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 DBTP11182 482 aaKnown RBP3.52□□□□□ -1.85
BRCA1-212ENST00000473961 ANXA3P12429 323 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 SLC1A4P43007 532 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 PPT1P50897 306 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 METAP1P53582 386 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 NTHL1P78549 312 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 BDH1Q02338 343 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 TFDP1Q14186 410 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 RAB35Q15286 201 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 CD226Q15762 336 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 DCST2Q5T1A1 773 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 CCDC183Q5T5S1 534 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 SEL1L3Q68CR1 1132 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 TMEM225Q6GV28 225 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 DPY19L4Q7Z388 723 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 NOTCH2NLQ7Z3S9 236 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 ANKRD37Q7Z713 158 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 TMEM17Q86X19 198 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 SYT14Q8NB59 555 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 AQP11Q8NBQ7 271 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 CTNNBL1Q8WYA6 563 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-212ENST00000473961 NABP1Q96AH0 204 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 AGAP3Q96P47 875 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 SLC39A3Q9BRY0 314 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 UBXN6Q9BZV1 441 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 COMMD4Q9H0A8 199 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 LIME1Q9H400 295 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 GORASP2Q9H8Y8 452 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 TXLNGQ9NUQ3 528 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 CRLS1Q9UJA2 301 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 PYCARDQ9ULZ3 195 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 MRPS33Q9Y291 106 aaKnown RBP3.52□□□□□ -1.85
BRCA1-212ENST00000473961 FBXO7Q9Y3I1 522 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF608Q9ULD9 1512 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-212ENST00000473961 RALGAPBQ86X10 1494 aa3.52□□□□□ -1.85
BRCA1-212ENST00000473961 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 UNC13AQ9UPW8 1703 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 IGLV4-3A0A075B6K6 122 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 PRR23AA6NEV1 266 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 NUDT21O43809 227 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 ZFAND5O76080 213 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 POP4O95707 220 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 OAS1P00973 400 aaKnown RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 MT-ND1P03886 318 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 HOXB7P09629 217 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 H2AFZP0C0S5 128 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 ZSCAN5DPP0CG00 497 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 PNMA6AP0CW24 399 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-212ENST00000473961 MX1P20591 662 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 RGS4P49798 205 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 MFAP2P55001 183 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 SELPLGQ14242 412 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 VWA2Q5GFL6 755 aa3.51□□□□□ -1.85
BRCA1-212ENST00000473961 SLX4IPQ5VYV7 408 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms